RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SPNS3Q6ZMD2 512 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 LHFPL4Q7Z7J7 247 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 TGIF2LXQ8IUE1 241 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 MUC15Q8N387 334 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 PNKDQ8N490 385 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 MAPK1IP1LQ8NDC0 245 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 C8orf46Q8TAG6 207 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 RNASEH2CQ8TDP1 164 aaKnown RBP2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 CACNG8Q8WXS5 425 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 TNFRSF14Q92956 283 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 BTF3L4Q96K17 158 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR5B12Q96R08 314 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 RNF2Q99496 336 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 C12orf57Q99622 126 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 NDUFAF3Q9BU61 184 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 C19orf24Q9BVV8 132 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 RAB1BQ9H0U4 201 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM133Q9H2Q1 129 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 NDUFA4L2Q9NRX3 87 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 DOK5Q9P104 306 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNRD1Q9P1U0 126 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 CTSZQ9UBR2 303 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 FUT9Q9Y231 359 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 SHANK1Q9Y566 2161 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGHV2-26A0A0B4J1V2 119 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 PPIAL4CA0A0B4J2A2 164 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 MDFIC2A0A1B0GVS7 189 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 PCP4L1A6NKN8 68 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 LYNX1G3V0Z9 82 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 K7EQM0 130 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BKO60814 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 FOXH1O75593 365 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 RBP4P02753 201 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BJP06899 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR5G3P0C626 314 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 TRGC1P0CF51 173 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 SMIM6P0DI80 62 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 C8orf88P0DMB2 117 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 PPIAL4GP0DN37 164 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 LYNX1P0DP58 116 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 DEFA4P12838 97 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 CD99P14209 185 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BOP23527 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 NPPCP23582 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 S100A2P29034 98 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BBP33778 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF137PP52743 207 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BDP58876 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 TAS2R45P59539 299 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BCP62807 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 S100A12P80511 92 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 KLF5Q13887 457 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 DIAPH2-AS1Q14236 149 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 PSG5Q15238 335 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 SSX2Q16385 188 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST2H2BEQ16778 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HLA-DRB5Q30154 266 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 FAM106AQ4KMX7 169 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 SPATA31B1PQ5VZV4 182 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF841Q6ZN19 808 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 Q6ZVQ6 151 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 MIR17HGQ75NE6 70 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 SLC16A13Q7RTY0 426 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 MOB3BQ86TA1 216 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 LINC01551Q86U37 167 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 C11orf42Q8N5U0 333 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 NECAP1Q8NC96 275 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR5T1Q8NG75 326 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR10W1Q8NGF6 305 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR8B3Q8NGG8 313 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR51G1Q8NGK1 321 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR4P4Q8NGL7 312 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR2T10Q8NGZ9 312 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM37Q8WXS4 190 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 FRZBQ92765 325 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BHQ93079 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 C2orf48Q96LS8 159 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 FAM218AQ96MZ4 157 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR8B2Q96RD0 313 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 IMMP2LQ96T52 175 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BNQ99877 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 HIST1H2BMQ99879 126 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 RNF5Q99942 180 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 CLEC7AQ9BXN2 247 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 MRPL32Q9BYC8 188 aaKnown RBP2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF430Q9H8G1 570 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM167BQ9NRX6 74 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 AMMECR1Q9Y4X0 333 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 INSIG2Q9Y5U4 225 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 ARL2-SNX15V9GYD0 113 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 AHCTF1Q8WYP5 2266 aa2.67□□□□□ -1.98
HMGB3P11-201ENST00000440127 DNAH14Q0VDD8 3507 aa2.66□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGHV1-3A0A0C4DH29 117 aa2.66□□□□□ -1.98
HMGB3P11-201ENST00000440127 A0A1W2PRE2 83 aa2.66□□□□□ -1.98
HMGB3P11-201ENST00000440127 TCRBV4S1A1TA0A5B7 111 aa2.66□□□□□ -1.98
HMGB3P11-201ENST00000440127 HELTA6NFD8 242 aa2.66□□□□□ -1.98
HMGB3P11-201ENST00000440127 C9JCJ5 164 aa2.66□□□□□ -1.98
HMGB3P11-201ENST00000440127 PPP5D1E7EU14 171 aa2.66□□□□□ -1.98
HMGB3P11-201ENST00000440127 E7EUB6 86 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms