RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 PSMB11A5LHX3 300 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 SHISA9B4DS77 424 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 Q6ZN92 141 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 Q8NA96 180 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 C3orf79P0CE67 100 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 PSG1P11464 419 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 TDGF1P3P51864 188 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 LINC00311Q8N616 119 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 TEX45Q8NA69 505 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 B9A039 149 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 EXOC3-AS1Q8N2X6 119 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 C5orf17Q8NAS9 161 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 OR4B1Q8NGF8 309 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 TSKUQ8WUA8 353 aa13.41□□□□□ -0.26
TTC3-209ENST00000438055 SPACA3Q8IXA5 215 aa13.4□□□□□ -0.26
TTC3-209ENST00000438055 C18orf32Q8TCD1 76 aa13.4□□□□□ -0.26
TTC3-209ENST00000438055 M0QZ24 198 aa13.4□□□□□ -0.26
TTC3-209ENST00000438055 CSN3P07498 182 aa13.4□□□□□ -0.26
TTC3-209ENST00000438055 A8MWL6 223 aa13.4□□□□□ -0.26
TTC3-209ENST00000438055 RPLP1P05386 114 aaKnown RBP13.4□□□□□ -0.26
TTC3-209ENST00000438055 TEX43Q6ZNM6 134 aa13.4□□□□□ -0.26
TTC3-209ENST00000438055 THAP8Q8NA92 274 aa13.4□□□□□ -0.26
TTC3-209ENST00000438055 PAX1P15863 534 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
TTC3-209ENST00000438055 PMCHL1Q16048 86 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 KLF17Q5JT82 389 aaPredicted RBP13.39□□□□□ -0.27
TTC3-209ENST00000438055 CYB5R2Q6BCY4 276 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 FAM71F2Q6NXP2 309 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 BUB1B-PAK6H3BSN5 160 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 GRNP28799 593 aaKnown RBP13.39□□□□□ -0.27
TTC3-209ENST00000438055 CA7P43166 264 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 TFPI2P48307 235 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 COMPP49747 757 aaPredicted RBP13.39□□□□□ -0.27
TTC3-209ENST00000438055 OR8B3Q8NGG8 313 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 OR8B2Q96RD0 313 aa13.39□□□□□ -0.27
TTC3-209ENST00000438055 RPP21Q9H633 154 aaKnown RBP13.39□□□□□ -0.27
TTC3-209ENST00000438055 TIMM23O14925 209 aa13.38□□□□□ -0.27
TTC3-209ENST00000438055 CIARTQ8N365 385 aaPredicted RBP13.38□□□□□ -0.27
TTC3-209ENST00000438055 TRGV9Q99603 122 aa13.38□□□□□ -0.27
TTC3-209ENST00000438055 NCBP2LA6PVI3 153 aaKnown RBP13.38□□□□□ -0.27
TTC3-209ENST00000438055 ZNF596Q8TC21 504 aa13.38□□□□□ -0.27
TTC3-209ENST00000438055 TCRAP04437 139 aa13.38□□□□□ -0.27
TTC3-209ENST00000438055 C20orf144Q9BQM9 153 aa13.38□□□□□ -0.27
TTC3-209ENST00000438055 F11RQ9Y624 299 aaKnown RBP13.38□□□□□ -0.27
TTC3-209ENST00000438055 ESDP10768 282 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 HBBP68871 147 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 C8orf46Q8TAG6 207 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 DLX6P56179 175 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 OR4F17Q8NGA8 305 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 SCNM1Q9BWG6 230 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 CLEC5AQ9NY25 188 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 KAAG1Q9UBP8 84 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 SH2D7A6NKC9 451 aaPredicted RBP13.37□□□□□ -0.27
TTC3-209ENST00000438055 M0QZK8 103 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 CCL21O00585 134 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 RAB4AP20338 218 aa13.37□□□□□ -0.27
TTC3-209ENST00000438055 TACC2O95359 2948 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 GDF5OSQ5U4N7 250 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 ZNF841Q6ZN19 808 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 RBM14Q96PK6 669 aaKnown RBP13.36□□□□□ -0.27
TTC3-209ENST00000438055 IL4P05112 153 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 FCGR2BP31994 310 aaPredicted RBP13.36□□□□□ -0.27
TTC3-209ENST00000438055 TMSB15BA0A087X1C1 80 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 INS-IGF2F8WCM5 200 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 MAJINQ3KP22 176 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 TMEM116Q8NCL8 245 aa13.36□□□□□ -0.27
TTC3-209ENST00000438055 SLC25A39Q9BZJ4 359 aaPredicted RBP13.36□□□□□ -0.27
TTC3-209ENST00000438055 HTR1DP28221 377 aa13.35□□□□□ -0.27
TTC3-209ENST00000438055 KLRD1Q13241 179 aa13.35□□□□□ -0.27
TTC3-209ENST00000438055 ZNF672Q499Z4 452 aaPredicted RBP13.35□□□□□ -0.27
TTC3-209ENST00000438055 LINC00322Q6ZN03 302 aaPredicted RBP13.35□□□□□ -0.27
TTC3-209ENST00000438055 SSX8Q7RTT4 187 aa13.35□□□□□ -0.27
TTC3-209ENST00000438055 C11orf42Q8N5U0 333 aa13.35□□□□□ -0.27
TTC3-209ENST00000438055 KLHDC1Q8N7A1 406 aa13.35□□□□□ -0.27
TTC3-209ENST00000438055 TIMD4Q96H15 378 aa13.35□□□□□ -0.27
TTC3-209ENST00000438055 GNG7O60262 68 aa13.35□□□□□ -0.27
TTC3-209ENST00000438055 NIT1Q86X76 327 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 FMC1Q96HJ9 113 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 IGHV3-35A0A0C4DH35 117 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 IGHV3-23P01764 117 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 UQCR10Q9UDW1 63 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 NCOR2Q9Y618 2525 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 LIPFP07098 398 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 BPIFA4PQ86YQ2 179 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 C8orf31Q8N9H6 132 aa13.34□□□□□ -0.27
TTC3-209ENST00000438055 IGHV3OR16-8A0A075B7F1 116 aa13.33□□□□□ -0.27
TTC3-209ENST00000438055 K7EQM0 130 aa13.33□□□□□ -0.27
TTC3-209ENST00000438055 IGLV1-47P01700 117 aa13.33□□□□□ -0.28
TTC3-209ENST00000438055 TNFRSF14Q92956 283 aa13.33□□□□□ -0.28
TTC3-209ENST00000438055 ALKBH7Q9BT30 221 aaPredicted RBP13.33□□□□□ -0.28
TTC3-209ENST00000438055 KALRNO60229 2985 aa13.33□□□□□ -0.28
TTC3-209ENST00000438055 IGLC1P0CG04 106 aa13.33□□□□□ -0.28
TTC3-209ENST00000438055 HINT1P49773 126 aaPredicted RBP13.33□□□□□ -0.28
TTC3-209ENST00000438055 ZNF138P52744 262 aa13.33□□□□□ -0.28
TTC3-209ENST00000438055 C17orf77Q96MU5 243 aa13.33□□□□□ -0.28
TTC3-209ENST00000438055 VKORC1Q9BQB6 163 aa13.33□□□□□ -0.28
TTC3-209ENST00000438055 GP9P14770 177 aa13.32□□□□□ -0.28
TTC3-209ENST00000438055 TNFRSF13BO14836 293 aaPredicted RBP13.32□□□□□ -0.28
TTC3-209ENST00000438055 TOMM40O96008 361 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms