RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 C17orf112F2Z3M2 114 aa12.73□□□□□ -0.37
CALD1-209ENST00000436461 K7EMT4 169 aa12.73□□□□□ -0.37
CALD1-209ENST00000436461 JTBO76095 146 aa12.73□□□□□ -0.37
CALD1-209ENST00000436461 NPPCP23582 126 aa12.73□□□□□ -0.37
CALD1-209ENST00000436461 Q6ZRG5 221 aa12.73□□□□□ -0.37
CALD1-209ENST00000436461 TMEM37Q8WXS4 190 aa12.73□□□□□ -0.37
CALD1-209ENST00000436461 ST8SIA2Q92186 375 aa12.73□□□□□ -0.37
CALD1-209ENST00000436461 MLXQ9UH92 298 aa12.73□□□□□ -0.37
CALD1-209ENST00000436461 IGHV7-4-1A0A0J9YVY3 117 aa12.72□□□□□ -0.37
CALD1-209ENST00000436461 HNRNPCP07910 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
CALD1-209ENST00000436461 CRYBB3P26998 211 aa12.72□□□□□ -0.37
CALD1-209ENST00000436461 FFAR4Q5NUL3 377 aa12.72□□□□□ -0.37
CALD1-209ENST00000436461 LEMD1Q68G75 181 aa12.72□□□□□ -0.37
CALD1-209ENST00000436461 ARV1Q9H2C2 271 aa12.72□□□□□ -0.37
CALD1-209ENST00000436461 SLC25A32Q9H2D1 315 aa12.72□□□□□ -0.37
CALD1-209ENST00000436461 VSIRQ9H7M9 311 aa12.72□□□□□ -0.37
CALD1-209ENST00000436461 MRPL27Q9P0M9 148 aaKnown RBP12.72□□□□□ -0.37
CALD1-209ENST00000436461 COX7A2P2O60397 106 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 HYPMO75409 117 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 EIF3GO75821 320 aaKnown RBP eCLIP12.71□□□□□ -0.37
CALD1-209ENST00000436461 CFDP00746 253 aaPredicted RBP12.71□□□□□ -0.37
CALD1-209ENST00000436461 PLP1P60201 277 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 PRR31Q5SQ13 230 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 MORN5Q5VZ52 161 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 PPP1R14BQ96C90 147 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 RHPN1-AS1Q9BWJ2 59 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 SCRT1Q9BWW7 348 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 SMPXQ9UHP9 88 aa12.71□□□□□ -0.37
CALD1-209ENST00000436461 CHEK1O14757 476 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 C8orf88P0DMB2 117 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 OXLD1Q5BKU9 147 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 RNF2Q99496 336 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 HIGD1AQ9Y241 93 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 DYNLRB2Q8TF09 96 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 SLC25A39Q9BZJ4 359 aaPredicted RBP12.7□□□□□ -0.38
CALD1-209ENST00000436461 SLC25A22Q9H936 323 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 TIMM9Q9Y5J7 89 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 U3KQE9 123 aa12.7□□□□□ -0.38
CALD1-209ENST00000436461 BUB3O43684 328 aa12.69□□□□□ -0.38
CALD1-209ENST00000436461 RAB2AP61019 212 aa12.69□□□□□ -0.38
CALD1-209ENST00000436461 C10orf113Q5VZT2 155 aa12.69□□□□□ -0.38
CALD1-209ENST00000436461 SPATA31B1PQ5VZV4 182 aa12.69□□□□□ -0.38
CALD1-209ENST00000436461 OR2G3Q8NGZ4 309 aa12.69□□□□□ -0.38
CALD1-209ENST00000436461 PSMG3Q9BT73 122 aaPredicted RBP12.69□□□□□ -0.38
CALD1-209ENST00000436461 DNAJC4Q9NNZ3 241 aa12.69□□□□□ -0.38
CALD1-209ENST00000436461 KCNIP2Q9NS61 270 aa12.69□□□□□ -0.38
CALD1-209ENST00000436461 IGKV3-7A0A075B6H7 116 aa12.68□□□□□ -0.38
CALD1-209ENST00000436461 TRAV5A0A0B4J249 113 aa12.68□□□□□ -0.38
CALD1-209ENST00000436461 IZUMO1RA6ND01 250 aa12.68□□□□□ -0.38
CALD1-209ENST00000436461 H3BRN7 92 aa12.68□□□□□ -0.38
CALD1-209ENST00000436461 CD300EQ496F6 205 aaPredicted RBP12.68□□□□□ -0.38
CALD1-209ENST00000436461 C9orf66Q5T8R8 295 aa12.68□□□□□ -0.38
CALD1-209ENST00000436461 MARC2Q969Z3 335 aa12.68□□□□□ -0.38
CALD1-209ENST00000436461 GNPNAT1Q96EK6 184 aaPredicted RBP12.68□□□□□ -0.38
CALD1-209ENST00000436461 SEPSECSQ9HD40 501 aaKnown RBP12.68□□□□□ -0.38
CALD1-209ENST00000436461 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
CALD1-209ENST00000436461 ZNF98A6NK75 572 aa12.67□□□□□ -0.38
CALD1-209ENST00000436461 SPP1P10451 314 aa12.67□□□□□ -0.38
CALD1-209ENST00000436461 TPT1P13693 172 aaKnown RBP12.67□□□□□ -0.38
CALD1-209ENST00000436461 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
CALD1-209ENST00000436461 FAM78BQ5VT40 261 aa12.67□□□□□ -0.38
CALD1-209ENST00000436461 BAP18Q8IXM2 172 aa12.67□□□□□ -0.38
CALD1-209ENST00000436461 OR1L4Q8NGR5 311 aa12.67□□□□□ -0.38
CALD1-209ENST00000436461 STOML3Q8TAV4 291 aa12.67□□□□□ -0.38
CALD1-209ENST00000436461 ELOA3CA0A087WX78 387 aaPredicted RBP12.66□□□□□ -0.38
CALD1-209ENST00000436461 G3V4G9 280 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 PXDC1Q5TGL8 231 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 C16orf54Q6UWD8 224 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 MIR17HGQ75NE6 70 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 SLC51BQ86UW2 128 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 TMED6Q8WW62 240 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 NARS2Q96I59 477 aaKnown RBP12.66□□□□□ -0.38
CALD1-209ENST00000436461 PFDN5Q99471 154 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 SHANK2-AS3Q9BTD1 123 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 MCRIP2Q9BUT9 160 aaKnown RBP12.66□□□□□ -0.38
CALD1-209ENST00000436461 SIGLEC8Q9NYZ4 499 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 A0A1W2PS18 150 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 IGLV1-51P01701 117 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 SNRPCP09234 159 aaKnown RBP12.66□□□□□ -0.38
CALD1-209ENST00000436461 FAM122CQ6P4D5 195 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 TCF24Q7RTU0 167 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
CALD1-209ENST00000436461 HMGB3O15347 200 aaKnown RBP12.65□□□□□ -0.38
CALD1-209ENST00000436461 M6PRP20645 277 aa12.65□□□□□ -0.38
CALD1-209ENST00000436461 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
CALD1-209ENST00000436461 SERF2P84101 59 aa12.65□□□□□ -0.38
CALD1-209ENST00000436461 ACOT6Q3I5F7 207 aaPredicted RBP12.65□□□□□ -0.38
CALD1-209ENST00000436461 OR8I2Q8N0Y5 310 aa12.65□□□□□ -0.38
CALD1-209ENST00000436461 OR10G4Q8NGN3 311 aa12.65□□□□□ -0.38
CALD1-209ENST00000436461 OR10G9Q8NGN4 311 aa12.65□□□□□ -0.38
CALD1-209ENST00000436461 OR10G7Q8NGN6 311 aa12.65□□□□□ -0.38
CALD1-209ENST00000436461 RPRMQ9NS64 109 aa12.65□□□□□ -0.38
CALD1-209ENST00000436461 EIF5AP63241 154 aaKnown RBP12.64□□□□□ -0.39
CALD1-209ENST00000436461 FAM90A2PQ658T7 463 aa12.64□□□□□ -0.39
CALD1-209ENST00000436461 GBGT1Q8N5D6 347 aa12.64□□□□□ -0.39
CALD1-209ENST00000436461 GRAMD2BQ96HH9 432 aa12.64□□□□□ -0.39
CALD1-209ENST00000436461 C4BPBP20851 252 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms