RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 KIF1BO60333 1816 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 A8MWV9 139 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 M0R378 163 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 KPNA3O00505 521 aaPredicted RBP-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 CYB5BO43169 146 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 DSCR4P56555 118 aaPredicted RBP-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 DEFA1P59665 94 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 C4orf22Q6V702 233 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 FBXO5Q9UKT4 447 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 FANCMQ8IYD8 2048 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 PTPRFP10586 1907 aa-0.03□□□□□ -2.41
LINC01239-201ENST00000433645 PIK3C2GO75747 1445 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 MYLKQ15746 1914 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 hCG_1818297A0A087WSY0 165 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 TRGV10A0A0A0MS01 117 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 A8MT66 165 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 E7EUB6 86 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 TIMM17BO60830 172 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 SERPINE1P05121 402 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 ROMO1P60602 79 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 RHOBP62745 196 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 EIF5AP63241 154 aaKnown RBP-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 HIST1H3AP68431 136 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 H3F3AP84243 136 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 ZNF431Q8TF32 576 aaPredicted RBP-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 YPEL2Q96QA6 119 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 TMEM126AQ9H061 195 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 JPT1Q9UK76 154 aa-0.04□□□□□ -2.42
LINC01239-201ENST00000433645 ZGRF1Q86YA3 2104 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 MEGF8Q7Z7M0 2845 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 A0A087WSZ3 146 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 A0A087WUJ7 227 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 TRAV10A0A0B4J240 114 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 C1orf196B1AJZ1 125 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 SRP14P37108 136 aaKnown RBP-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 EDDM3AQ14507 147 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 LYRM7Q5U5X0 104 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 TSKUQ8WUA8 353 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 PSTPIP2Q9H939 334 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 MED29Q9NX70 200 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 FMN1Q68DA7 1419 aa-0.05□□□□□ -2.42
LINC01239-201ENST00000433645 ARHGEF11O15085 1522 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 H3BRM9 83 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 FREM3P0C091 2139 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 COX7CP15954 63 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 C22orf39Q6P5X5 142 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 TEN1Q86WV5 123 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 TRIM4Q9C037 500 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 PCTPQ9UKL6 214 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 LY96Q9Y6Y9 160 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 IGSF10Q6WRI0 2623 aa-0.06□□□□□ -2.42
LINC01239-201ENST00000433645 KNTC1P50748 2209 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 F8W1H4 67 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 ERC2-IT1O76042 136 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 SMIM17P0DL12 118 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 ZNF137PP52743 207 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 FXYD6P3P58550 94 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 KRR1Q13601 381 aaKnown RBP-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 OR10K1Q8NGX5 313 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 SLC25A40Q8TBP6 338 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 DDI1Q8WTU0 396 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 GLTPQ9NZD2 209 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 HSPB8Q9UJY1 196 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 RFX7Q2KHR2 1363 aa-0.07□□□□□ -2.42
LINC01239-201ENST00000433645 PDE6DO43924 150 aa-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 SRIP30626 198 aa-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 RANP62826 216 aaKnown RBP-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 PDZD9Q8IXQ8 264 aa-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 OR52L1Q8NGH7 329 aa-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 OR5D14Q8NGL3 314 aa-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 NABP2Q9BQ15 211 aa-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 FAM103A1Q9BTL3 118 aaKnown RBP-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 CCDC94Q9BW85 323 aaPredicted RBP-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 PARVBQ9HBI1 364 aa-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 TMEM138Q9NPI0 162 aa-0.08□□□□□ -2.42
LINC01239-201ENST00000433645 UBR2Q8IWV8 1755 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 PTPRZ1P23471 2315 aaPredicted RBP-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 CXCL8P10145 99 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 SPTBP11277 2137 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 RRN3P1Q2M238 152 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 SPATA45Q537H7 98 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 TMEM97Q5BJF2 176 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 GLIPR1L1Q6UWM5 242 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 TRAPPC5Q8IUR0 188 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 OR51A2Q8NGJ7 313 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 OR10AG1Q8NH19 301 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 CCDC42Q96M95 316 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 SLC25A21Q9BQT8 299 aaPredicted RBP-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 PBOV1Q9GZY1 135 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 RNASE7Q9H1E1 156 aaKnown RBP-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 UQCC1Q9NVA1 299 aa-0.09□□□□□ -2.42
LINC01239-201ENST00000433645 TRAV4A0A0B4J268 109 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 C17orf112F2Z3M2 114 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 NDUFB3O43676 98 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 RPP14O95059 124 aaKnown RBP-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 HAND1O96004 215 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 CEBPGP53567 150 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 MYL5Q02045 173 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 PTRHD1Q6GMV3 140 aaKnown RBP-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms