RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 GINS3Q9BRX5 216 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 MBD2Q9UBB5 411 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 TENM2Q9NT68 2774 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 DYNC2H1Q8NCM8 4307 aaKnown RBP9.38□□□□□ -0.91
GPC1-204ENST00000426280 P2RY1P47900 373 aa9.37□□□□□ -0.91
GPC1-204ENST00000426280 SULT1A1P50225 295 aa9.37□□□□□ -0.91
GPC1-204ENST00000426280 DEFB131AP59861 70 aa9.37□□□□□ -0.91
GPC1-204ENST00000426280 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
GPC1-204ENST00000426280 OR51G1Q8NGK1 321 aa9.37□□□□□ -0.91
GPC1-204ENST00000426280 NPVFQ9HCQ7 196 aa9.37□□□□□ -0.91
GPC1-204ENST00000426280 RYR2Q92736 4967 aa9.37□□□□□ -0.91
GPC1-204ENST00000426280 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
GPC1-204ENST00000426280 K7EQG2 157 aa9.36□□□□□ -0.91
GPC1-204ENST00000426280 SPRY2O43597 315 aa9.36□□□□□ -0.91
GPC1-204ENST00000426280 GIPP09681 153 aaPredicted RBP9.36□□□□□ -0.91
GPC1-204ENST00000426280 RPL11P62913 178 aaKnown RBP9.36□□□□□ -0.91
GPC1-204ENST00000426280 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
GPC1-204ENST00000426280 STX12Q86Y82 276 aa9.36□□□□□ -0.91
GPC1-204ENST00000426280 DCANP1Q8TF63 244 aa9.36□□□□□ -0.91
GPC1-204ENST00000426280 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
GPC1-204ENST00000426280 METTL26Q96S19 204 aa9.36□□□□□ -0.91
GPC1-204ENST00000426280 PBDC1Q9BVG4 233 aa9.36□□□□□ -0.91
GPC1-204ENST00000426280 UBE2L5PA0A1B0GUS4 154 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 FNDC10F2Z333 226 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 DNASE2O00115 360 aaPredicted RBP9.35□□□□□ -0.91
GPC1-204ENST00000426280 LYZP61626 148 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 Q6ZNX1 250 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 CYP2G1PQ6ZSU1 146 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 STXBP6Q8NFX7 210 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 OR5C1Q8NGR4 320 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 THAP6Q8TBB0 222 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 RNF183Q96D59 192 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 RNF125Q96EQ8 232 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 SLC25A31Q9H0C2 315 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 RABAC1Q9UI14 185 aa9.35□□□□□ -0.91
GPC1-204ENST00000426280 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 G3V3Q6 166 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 SMLR1H3BR10 107 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
GPC1-204ENST00000426280 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.91
GPC1-204ENST00000426280 PET100P0DJ07 73 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 RPL12P30050 165 aaKnown RBP9.34□□□□□ -0.91
GPC1-204ENST00000426280 S100A11P31949 105 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 RAP2BP61225 183 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 CLINT1Q14677 625 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 VWC2Q2TAL6 325 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 TEPPQ6URK8 271 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 Q6ZWC4 215 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 MGST2Q99735 147 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 TMEM147Q9BVK8 224 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 SMIM3Q9BZL3 60 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 UQCC1Q9NVA1 299 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 DOK5Q9P104 306 aa9.34□□□□□ -0.91
GPC1-204ENST00000426280 AGPAT2O15120 278 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 BUB3O43684 328 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 FABP1P07148 127 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 ZNF688P0C7X2 276 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 APOC4P55056 127 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 DEFB1P60022 68 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 HBG1P69891 147 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 HBG2P69892 147 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 BPIFCQ8NFQ6 507 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 OR2T35Q8NGX2 323 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 CSTL1Q9H114 145 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 SLC45A2Q9UMX9 530 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 WDR83OSQ9Y284 106 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 HSPB11Q9Y547 144 aa9.33□□□□□ -0.92
GPC1-204ENST00000426280 hCG_2014768A0A024R1R8 64 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 KIR2DL5BA0A0G2JN68 375 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 KIR2DL5BA0A0G2JPC4 375 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 A0A1W2PS18 150 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 UBE2CO00762 179 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 LINC00869P0C866 280 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 ORM2P19652 201 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 PAFAH1B2P68402 229 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 BAXQ07812 192 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 ATP6V1FQ16864 119 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 KIR2DL5AQ8N109 375 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 KIR2DL5BQ8NHK3 375 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 WFDC1Q9HC57 220 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 TP53TG1Q9Y2A0 90 aa9.32□□□□□ -0.92
GPC1-204ENST00000426280 FXYD6-FXYD2A0A087WZ82 144 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 LCE6AA0A183 80 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 FGF7P21781 194 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 CAMLGP49069 296 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 EIF2B2P49770 351 aaKnown RBP9.31□□□□□ -0.92
GPC1-204ENST00000426280 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
GPC1-204ENST00000426280 FGL1Q08830 312 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 MIC13Q5XKP0 118 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
GPC1-204ENST00000426280 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 ASB13Q8WXK3 278 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 TMEM231Q9H6L2 316 aa9.31□□□□□ -0.92
GPC1-204ENST00000426280 DEFB4AO15263 64 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms