RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 KANTRA0A1W2PQU2 76 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 CHEK1O14757 476 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 ORM2P19652 201 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 C4BPBP20851 252 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 SAMD5Q5TGI4 173 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 OR11H4Q8NGC9 324 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 OR1B1Q8NGR6 318 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 ARPC5LQ9BPX5 153 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 HIGD1AQ9Y241 93 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 TIMM9Q9Y5J7 89 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 PXMP4Q9Y6I8 212 aa18.27■□□□□ 0.52
APOE-202ENST00000425718 GATA2P23769 480 aaPredicted RBP18.26■□□□□ 0.51
APOE-202ENST00000425718 EIF5AP63241 154 aaKnown RBP18.26■□□□□ 0.51
APOE-202ENST00000425718 PRR20EP86478 221 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 PRR20CP86479 221 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 PRR20DP86480 221 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 PRR20BP86481 221 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 PRR20AP86496 221 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 DEFB114Q30KQ6 69 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 ZFP69Q49AA0 526 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 C1orf194Q5T5A4 169 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 ARL6Q9H0F7 186 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 SLC39A9Q9NUM3 307 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 U3KQE9 123 aa18.26■□□□□ 0.51
APOE-202ENST00000425718 COX7A2P2O60397 106 aa18.25■□□□□ 0.51
APOE-202ENST00000425718 RBPMS2Q6ZRY4 209 aaKnown RBP18.25■□□□□ 0.51
APOE-202ENST00000425718 GNPNAT1Q96EK6 184 aaPredicted RBP18.25■□□□□ 0.51
APOE-202ENST00000425718 WFDC1Q9HC57 220 aa18.25■□□□□ 0.51
APOE-202ENST00000425718 HELTA6NFD8 242 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 OR5G3P0C626 314 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 OXLD1Q5BKU9 147 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 MIC13Q5XKP0 118 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 ADAMTSL5Q6ZMM2 481 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 GATAD1Q8WUU5 269 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 GPR82Q96P67 336 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 RNF2Q99496 336 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 MLXQ9UH92 298 aa18.24■□□□□ 0.51
APOE-202ENST00000425718 PFDN1O60925 122 aa18.23■□□□□ 0.51
APOE-202ENST00000425718 PAFAH1B2P68402 229 aa18.23■□□□□ 0.51
APOE-202ENST00000425718 EGFEM1PQ0D2K5 195 aa18.23■□□□□ 0.51
APOE-202ENST00000425718 TMEM182Q6ZP80 229 aaPredicted RBP18.23■□□□□ 0.51
APOE-202ENST00000425718 ST8SIA2Q92186 375 aa18.23■□□□□ 0.51
APOE-202ENST00000425718 PSMG3Q9BT73 122 aaPredicted RBP18.23■□□□□ 0.51
APOE-202ENST00000425718 ARV1Q9H2C2 271 aa18.23■□□□□ 0.51
APOE-202ENST00000425718 DNAJC4Q9NNZ3 241 aa18.23■□□□□ 0.51
APOE-202ENST00000425718 BUB3O43684 328 aa18.22■□□□□ 0.51
APOE-202ENST00000425718 C10orf113Q5VZT2 155 aa18.22■□□□□ 0.51
APOE-202ENST00000425718 BCL2L11O43521 198 aa18.21■□□□□ 0.51
APOE-202ENST00000425718 SERF2P84101 59 aa18.21■□□□□ 0.51
APOE-202ENST00000425718 CD300EQ496F6 205 aaPredicted RBP18.21■□□□□ 0.51
APOE-202ENST00000425718 C16orf54Q6UWD8 224 aa18.21■□□□□ 0.51
APOE-202ENST00000425718 SLC25A39Q9BZJ4 359 aaPredicted RBP18.21■□□□□ 0.51
APOE-202ENST00000425718 DOK5Q9P104 306 aa18.21■□□□□ 0.51
APOE-202ENST00000425718 IGHV3-49A0A0A0MS15 119 aa18.2■□□□□ 0.5
APOE-202ENST00000425718 G3V4G9 280 aa18.2■□□□□ 0.5
APOE-202ENST00000425718 TSPAN4O14817 238 aa18.2■□□□□ 0.5
APOE-202ENST00000425718 MBP02144 154 aa18.2■□□□□ 0.5
APOE-202ENST00000425718 RPL7L1Q6DKI1 246 aaKnown RBP18.2■□□□□ 0.5
APOE-202ENST00000425718 TMUB2Q71RG4 321 aa18.2■□□□□ 0.5
APOE-202ENST00000425718 SPAG8Q99932 426 aaPredicted RBP18.2■□□□□ 0.5
APOE-202ENST00000425718 SHANK2-AS3Q9BTD1 123 aa18.2■□□□□ 0.5
APOE-202ENST00000425718 RSG1Q9BU20 258 aa18.2■□□□□ 0.5
APOE-202ENST00000425718 ZNF98A6NK75 572 aa18.19■□□□□ 0.5
APOE-202ENST00000425718 H3BRN7 92 aa18.19■□□□□ 0.5
APOE-202ENST00000425718 CXCL2P19875 107 aa18.19■□□□□ 0.5
APOE-202ENST00000425718 ACOT6Q3I5F7 207 aaPredicted RBP18.19■□□□□ 0.5
APOE-202ENST00000425718 KPRPQ5T749 579 aaPredicted RBP18.19■□□□□ 0.5
APOE-202ENST00000425718 TCF24Q7RTU0 167 aa18.19■□□□□ 0.5
APOE-202ENST00000425718 OR8I2Q8N0Y5 310 aa18.19■□□□□ 0.5
APOE-202ENST00000425718 HSD17B11Q8NBQ5 300 aa18.19■□□□□ 0.5
APOE-202ENST00000425718 OR2G3Q8NGZ4 309 aa18.19■□□□□ 0.5
APOE-202ENST00000425718 GLMPQ8WWB7 406 aa18.19■□□□□ 0.5
APOE-202ENST00000425718 IGHV3OR16-13A0A075B7E8 117 aa18.18■□□□□ 0.5
APOE-202ENST00000425718 IGHV3-74A0A0B4J1X5 117 aa18.18■□□□□ 0.5
APOE-202ENST00000425718 TRAV2A0A0B4J234 112 aa18.18■□□□□ 0.5
APOE-202ENST00000425718 APOHP02749 345 aaPredicted RBP18.18■□□□□ 0.5
APOE-202ENST00000425718 RPL7P18124 248 aaKnown RBP18.18■□□□□ 0.5
APOE-202ENST00000425718 EDN2P20800 178 aa18.18■□□□□ 0.5
APOE-202ENST00000425718 GALR1P47211 349 aa18.18■□□□□ 0.5
APOE-202ENST00000425718 FFAR4Q5NUL3 377 aa18.18■□□□□ 0.5
APOE-202ENST00000425718 SAMD13Q5VXD3 122 aa18.18■□□□□ 0.5
APOE-202ENST00000425718 LINC00305Q7Z4B0 112 aa18.18■□□□□ 0.5
APOE-202ENST00000425718 MRPL32Q9BYC8 188 aaKnown RBP18.18■□□□□ 0.5
APOE-202ENST00000425718 ZNF256Q9Y2P7 627 aaPredicted RBP18.18■□□□□ 0.5
APOE-202ENST00000425718 ATP6V0CP27449 155 aa18.17■□□□□ 0.5
APOE-202ENST00000425718 RPL11P62913 178 aaKnown RBP18.17■□□□□ 0.5
APOE-202ENST00000425718 FAM90A2PQ658T7 463 aa18.17■□□□□ 0.5
APOE-202ENST00000425718 SIGLEC15Q6ZMC9 328 aa18.17■□□□□ 0.5
APOE-202ENST00000425718 TMEM61Q8N0U2 210 aa18.17■□□□□ 0.5
APOE-202ENST00000425718 ZNF471Q9BX82 626 aaPredicted RBP18.17■□□□□ 0.5
APOE-202ENST00000425718 OR4C46A6NHA9 309 aa18.16■□□□□ 0.5
APOE-202ENST00000425718 MEOX2P50222 304 aa18.16■□□□□ 0.5
APOE-202ENST00000425718 CMC4P56277 68 aaPredicted RBP18.16■□□□□ 0.5
APOE-202ENST00000425718 BEAN1Q3B7T3 259 aa18.16■□□□□ 0.5
APOE-202ENST00000425718 PATE2Q6UY27 113 aa18.16■□□□□ 0.5
APOE-202ENST00000425718 TMEM37Q8WXS4 190 aa18.16■□□□□ 0.5
APOE-202ENST00000425718 IGHV3-66A0A0C4DH42 116 aa18.15■□□□□ 0.5
APOE-202ENST00000425718 DNASE2O00115 360 aaPredicted RBP18.15■□□□□ 0.5
APOE-202ENST00000425718 GP9P14770 177 aa18.15■□□□□ 0.5
APOE-202ENST00000425718 M6PRP20645 277 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms