RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 ODF3L2Q3SX64 289 aa13.74□□□□□ -0.21
HDAC6-205ENST00000423941 DCANP1Q8TF63 244 aa13.74□□□□□ -0.21
HDAC6-205ENST00000423941 PFDN2Q9UHV9 154 aa13.74□□□□□ -0.21
HDAC6-205ENST00000423941 HELTA6NFD8 242 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 K7EQG2 157 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 GIPP09681 153 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-205ENST00000423941 LINC00869P0C866 280 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 AP2S1P53680 142 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-205ENST00000423941 CMC4P56277 68 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-205ENST00000423941 PAFAH1B2P68402 229 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 PXDC1Q5TGL8 231 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 DEFB125Q8N687 156 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 CITED4Q96RK1 184 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 WFDC10AQ9H1F0 79 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 MBD2Q9UBB5 411 aa13.73□□□□□ -0.21
HDAC6-205ENST00000423941 PRR20EP86478 221 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 PRR20CP86479 221 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 PRR20DP86480 221 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 PRR20BP86481 221 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 PRR20AP86496 221 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 PATE2Q6UY27 113 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 ZNF546Q86UE3 836 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 SBSPONQ8IVN8 264 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 GBGT1Q8N5D6 347 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 OR5C1Q8NGR4 320 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 GGTLC1Q9BX51 225 aa13.72□□□□□ -0.21
HDAC6-205ENST00000423941 RBMY1BA6NDE4 496 aaKnown RBP13.71□□□□□ -0.21
HDAC6-205ENST00000423941 RBMY1EA6NEQ0 496 aaKnown RBP13.71□□□□□ -0.21
HDAC6-205ENST00000423941 ZNF98A6NK75 572 aa13.71□□□□□ -0.21
HDAC6-205ENST00000423941 MPDU1O75352 247 aa13.71□□□□□ -0.21
HDAC6-205ENST00000423941 RBMY1DP0C7P1 496 aaKnown RBP13.71□□□□□ -0.21
HDAC6-205ENST00000423941 NHLRC4P0CG21 123 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-205ENST00000423941 ORM2P19652 201 aa13.71□□□□□ -0.21
HDAC6-205ENST00000423941 RPL29P47914 159 aaKnown RBP13.71□□□□□ -0.21
HDAC6-205ENST00000423941 RAP2BP61225 183 aa13.71□□□□□ -0.21
HDAC6-205ENST00000423941 FBXL17Q9UF56 701 aa13.71□□□□□ -0.21
HDAC6-205ENST00000423941 HSPB11Q9Y547 144 aa13.71□□□□□ -0.21
HDAC6-205ENST00000423941 IGKV3-7A0A075B6H7 116 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 HYPMO75409 117 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 RPL12P30050 165 aaKnown RBP13.7□□□□□ -0.22
HDAC6-205ENST00000423941 CAMLGP49069 296 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 RPL11P62913 178 aaKnown RBP13.7□□□□□ -0.22
HDAC6-205ENST00000423941 RAB31Q13636 194 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 Q5BKY6 102 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 SIGLEC15Q6ZMC9 328 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 FAM24BQ8N5W8 94 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 TUBA4BQ9H853 241 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 SRD5A3Q9H8P0 318 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 SEPSECSQ9HD40 501 aaKnown RBP13.7□□□□□ -0.22
HDAC6-205ENST00000423941 DNAH9Q9NYC9 4486 aa13.7□□□□□ -0.22
HDAC6-205ENST00000423941 H3BRN7 92 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 DNASE2O00115 360 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-205ENST00000423941 TFPI2P48307 235 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 FGL1Q08830 312 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 OPCMLQ14982 345 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 OR1B1Q8NGR6 318 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 THAP6Q8TBB0 222 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 C17orf77Q96MU5 243 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 SHANK2-AS3Q9BTD1 123 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 SLC25A39Q9BZJ4 359 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-205ENST00000423941 MAP6D1Q9H9H5 199 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 NRN1Q9NPD7 142 aa13.69□□□□□ -0.22
HDAC6-205ENST00000423941 UBE2L5PA0A1B0GUS4 154 aa13.68□□□□□ -0.22
HDAC6-205ENST00000423941 S100A7P31151 101 aa13.68□□□□□ -0.22
HDAC6-205ENST00000423941 STXBP6Q8NFX7 210 aa13.68□□□□□ -0.22
HDAC6-205ENST00000423941 TMEM37Q8WXS4 190 aa13.68□□□□□ -0.22
HDAC6-205ENST00000423941 TM2D3Q9BRN9 247 aa13.68□□□□□ -0.22
HDAC6-205ENST00000423941 ARL6Q9H0F7 186 aa13.68□□□□□ -0.22
HDAC6-205ENST00000423941 UBQLN2Q9UHD9 624 aa13.68□□□□□ -0.22
HDAC6-205ENST00000423941 HIGD1AQ9Y241 93 aa13.68□□□□□ -0.22
HDAC6-205ENST00000423941 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-205ENST00000423941 G3V3Q6 166 aa13.67□□□□□ -0.22
HDAC6-205ENST00000423941 HAGHQ16775 308 aa13.67□□□□□ -0.22
HDAC6-205ENST00000423941 MIC13Q5XKP0 118 aa13.67□□□□□ -0.22
HDAC6-205ENST00000423941 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
HDAC6-205ENST00000423941 OR8I2Q8N0Y5 310 aa13.67□□□□□ -0.22
HDAC6-205ENST00000423941 GPR82Q96P67 336 aa13.67□□□□□ -0.22
HDAC6-205ENST00000423941 ASCL2Q99929 193 aa13.67□□□□□ -0.22
HDAC6-205ENST00000423941 WDR61Q9GZS3 305 aaKnown RBP13.67□□□□□ -0.22
HDAC6-205ENST00000423941 SLC25A32Q9H2D1 315 aa13.67□□□□□ -0.22
HDAC6-205ENST00000423941 SOCS3O14543 225 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 FGF7P21781 194 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 PPP1R14BQ96C90 147 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 AQP10Q96PS8 301 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 UHRF2Q96PU4 802 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 ATP5SQ99766 215 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 SCRT1Q9BWW7 348 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 NPCDR1Q9BY65 106 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 ARV1Q9H2C2 271 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 SLC39A9Q9NUM3 307 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 DOK5Q9P104 306 aa13.66□□□□□ -0.22
HDAC6-205ENST00000423941 OR5G3P0C626 314 aa13.65□□□□□ -0.22
HDAC6-205ENST00000423941 CLINT1Q14677 625 aa13.65□□□□□ -0.22
HDAC6-205ENST00000423941 S100A7AQ86SG5 101 aa13.65□□□□□ -0.22
HDAC6-205ENST00000423941 APRG1Q8IVJ8 170 aa13.65□□□□□ -0.22
HDAC6-205ENST00000423941 PARD6GQ9BYG4 376 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-205ENST00000423941 DNAJC4Q9NNZ3 241 aa13.65□□□□□ -0.22
HDAC6-205ENST00000423941 MRPS12O15235 138 aaKnown RBP13.64□□□□□ -0.23
HDAC6-205ENST00000423941 DEFB131AP59861 70 aa13.64□□□□□ -0.23
HDAC6-205ENST00000423941 ZNF124Q15973 351 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms