RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 A0A1W2PS18 150 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 APOHP02749 345 aaPredicted RBP13.28□□□□□ -0.28
LINC00271-201ENST00000421378 PXDC1Q5TGL8 231 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 RPL7L1Q6DKI1 246 aaKnown RBP13.28□□□□□ -0.28
LINC00271-201ENST00000421378 SLC39A9Q9NUM3 307 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 TECRQ9NZ01 308 aaKnown RBP13.28□□□□□ -0.28
LINC00271-201ENST00000421378 MLXQ9UH92 298 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 PFDN2Q9UHV9 154 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 MGAM2Q2M2H8 2515 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 IGHV3-66A0A0C4DH42 116 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 KANTRA0A1W2PQU2 76 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 CHEK1O14757 476 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 WIPF1O43516 503 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 HYPMO75409 117 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 JTBO76095 146 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 IGLV1-51P01701 117 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 OR5G3P0C626 314 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 HSD17B11Q8NBQ5 300 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 ST8SIA2Q92186 375 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 PPP1R14BQ96C90 147 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 TMEM231Q9H6L2 316 aa13.28□□□□□ -0.28
LINC00271-201ENST00000421378 BCL2L11O43521 198 aa13.27□□□□□ -0.29
LINC00271-201ENST00000421378 LGALSLQ3ZCW2 172 aaPredicted RBP13.27□□□□□ -0.29
LINC00271-201ENST00000421378 TMUB2Q71RG4 321 aa13.27□□□□□ -0.29
LINC00271-201ENST00000421378 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.29
LINC00271-201ENST00000421378 ARV1Q9H2C2 271 aa13.27□□□□□ -0.29
LINC00271-201ENST00000421378 VSIRQ9H7M9 311 aa13.27□□□□□ -0.29
LINC00271-201ENST00000421378 HIGD1AQ9Y241 93 aa13.27□□□□□ -0.29
LINC00271-201ENST00000421378 U3KQE9 123 aa13.27□□□□□ -0.29
LINC00271-201ENST00000421378 ELOA3CA0A087WX78 387 aaPredicted RBP13.26□□□□□ -0.29
LINC00271-201ENST00000421378 G3V4G9 280 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 BUB3O43684 328 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 COX7A2P2O60397 106 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 S100A7P31151 101 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 DEFB114Q30KQ6 69 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 CD300EQ496F6 205 aaPredicted RBP13.26□□□□□ -0.29
LINC00271-201ENST00000421378 SAMD5Q5TGI4 173 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 S100A7AQ86SG5 101 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 UHRF2Q96PU4 802 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 PFDN5Q99471 154 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 RNF2Q99496 336 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 CYTL1Q9NRR1 136 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 SELENOKQ9Y6D0 94 aa13.26□□□□□ -0.29
LINC00271-201ENST00000421378 ATP6V0CP27449 155 aa13.25□□□□□ -0.29
LINC00271-201ENST00000421378 OR1L4Q8NGR5 311 aa13.25□□□□□ -0.29
LINC00271-201ENST00000421378 SLC25A39Q9BZJ4 359 aaPredicted RBP13.25□□□□□ -0.29
LINC00271-201ENST00000421378 TIMM9Q9Y5J7 89 aa13.25□□□□□ -0.29
LINC00271-201ENST00000421378 C10orf113Q5VZT2 155 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 PATE2Q6UY27 113 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 OR2K2Q8NGT1 345 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 TMEM37Q8WXS4 190 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 ZNF471Q9BX82 626 aaPredicted RBP13.24□□□□□ -0.29
LINC00271-201ENST00000421378 DNAJC4Q9NNZ3 241 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 FFAR4Q5NUL3 377 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 LCN12Q6JVE5 192 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 RBPMS2Q6ZRY4 209 aaKnown RBP13.24□□□□□ -0.29
LINC00271-201ENST00000421378 LINC00305Q7Z4B0 112 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 TMEM61Q8N0U2 210 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 C9orf62Q8N4C0 152 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 GNPNAT1Q96EK6 184 aaPredicted RBP13.24□□□□□ -0.29
LINC00271-201ENST00000421378 PSMG3Q9BT73 122 aaPredicted RBP13.24□□□□□ -0.29
LINC00271-201ENST00000421378 SLC25A22Q9H936 323 aa13.24□□□□□ -0.29
LINC00271-201ENST00000421378 ZNF98A6NK75 572 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 H3BRN7 92 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 CD5P06127 495 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 NKX2-5P52952 324 aaPredicted RBP13.23□□□□□ -0.29
LINC00271-201ENST00000421378 GCSAMLQ5JQS6 135 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 C1orf194Q5T5A4 169 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 LAMTOR1Q6IAA8 161 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 C16orf54Q6UWD8 224 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 GATAD1Q8WUU5 269 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 SCRT1Q9BWW7 348 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 SH3BGRL3Q9H299 93 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 RFNGQ9Y644 331 aa13.23□□□□□ -0.29
LINC00271-201ENST00000421378 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
LINC00271-201ENST00000421378 TCF24Q7RTU0 167 aa13.22□□□□□ -0.29
LINC00271-201ENST00000421378 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
LINC00271-201ENST00000421378 OR2G3Q8NGZ4 309 aa13.22□□□□□ -0.29
LINC00271-201ENST00000421378 GLMPQ8WWB7 406 aa13.22□□□□□ -0.29
LINC00271-201ENST00000421378 RNF24Q9Y225 148 aa13.22□□□□□ -0.29
LINC00271-201ENST00000421378 TRAV25A0A0B4J276 109 aa13.21□□□□□ -0.29
LINC00271-201ENST00000421378 IZUMO1RA6ND01 250 aa13.21□□□□□ -0.29
LINC00271-201ENST00000421378 HELTA6NFD8 242 aa13.21□□□□□ -0.29
LINC00271-201ENST00000421378 RPL11P62913 178 aaKnown RBP13.21□□□□□ -0.29
LINC00271-201ENST00000421378 SERF2P84101 59 aa13.21□□□□□ -0.29
LINC00271-201ENST00000421378 EGFEM1PQ0D2K5 195 aa13.21□□□□□ -0.29
LINC00271-201ENST00000421378 FAM90A2PQ658T7 463 aa13.21□□□□□ -0.29
LINC00271-201ENST00000421378 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.29
LINC00271-201ENST00000421378 SLC25A32Q9H2D1 315 aa13.21□□□□□ -0.29
LINC00271-201ENST00000421378 C4BPBP20851 252 aa13.2□□□□□ -0.3
LINC00271-201ENST00000421378 EIF5AP63241 154 aaKnown RBP13.2□□□□□ -0.3
LINC00271-201ENST00000421378 FAM78BQ5VT40 261 aa13.2□□□□□ -0.3
LINC00271-201ENST00000421378 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
LINC00271-201ENST00000421378 IGKV3-7A0A075B6H7 116 aa13.2□□□□□ -0.3
LINC00271-201ENST00000421378 TSPAN4O14817 238 aa13.2□□□□□ -0.3
LINC00271-201ENST00000421378 TPT1P13693 172 aaKnown RBP13.2□□□□□ -0.3
LINC00271-201ENST00000421378 M6PRP20645 277 aa13.2□□□□□ -0.3
LINC00271-201ENST00000421378 GUCA2BQ16661 112 aa13.2□□□□□ -0.3
LINC00271-201ENST00000421378 ACOT6Q3I5F7 207 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms