RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 S100A7P31151 101 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
LSM5-207ENST00000410044 SERF2P84101 59 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 STOML3Q8TAV4 291 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 GATAD1Q8WUU5 269 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 TMEM37Q8WXS4 190 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 DNAJC4Q9NNZ3 241 aa11.54□□□□□ -0.56
LSM5-207ENST00000410044 A0A1W2PS18 150 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 CHEK1O14757 476 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
LSM5-207ENST00000410044 ORM2P19652 201 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 EDN2P20800 178 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 C4BPBP20851 252 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 C9orf66Q5T8R8 295 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 S100A7AQ86SG5 101 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 HSD17B11Q8NBQ5 300 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 OR1L4Q8NGR5 311 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 OR1B1Q8NGR6 318 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 PBDC1Q9BVG4 233 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 ZNF471Q9BX82 626 aaPredicted RBP11.53□□□□□ -0.56
LSM5-207ENST00000410044 TECRQ9NZ01 308 aaKnown RBP11.53□□□□□ -0.56
LSM5-207ENST00000410044 PFDN2Q9UHV9 154 aa11.53□□□□□ -0.56
LSM5-207ENST00000410044 SEC14L6B5MCN3 397 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 APOHP02749 345 aaPredicted RBP11.52□□□□□ -0.57
LSM5-207ENST00000410044 SPP1P10451 314 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 BMI1P35226 326 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 NKX2-5P52952 324 aaPredicted RBP11.52□□□□□ -0.57
LSM5-207ENST00000410044 DEFB114Q30KQ6 69 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 C1orf194Q5T5A4 169 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 C16orf54Q6UWD8 224 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 SLC51BQ86UW2 128 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 BAP18Q8IXM2 172 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 PFDN5Q99471 154 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 RFNGQ9Y644 331 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 VWFP04275 2813 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 TRRAPQ9Y4A5 3859 aa11.52□□□□□ -0.57
LSM5-207ENST00000410044 H3BRN7 92 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 IGLV1-51P01701 117 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 CD5P06127 495 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 OR5G3P0C626 314 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 SEC11BP0C7V7 166 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 TPT1P13693 172 aaKnown RBP11.51□□□□□ -0.57
LSM5-207ENST00000410044 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 FAM90A2PQ658T7 463 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 OR2K2Q8NGT1 345 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
LSM5-207ENST00000410044 RNF2Q99496 336 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 SHANK2-AS3Q9BTD1 123 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 SLC25A39Q9BZJ4 359 aaPredicted RBP11.51□□□□□ -0.57
LSM5-207ENST00000410044 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 TMEM231Q9H6L2 316 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 MLXQ9UH92 298 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 RNF24Q9Y225 148 aa11.51□□□□□ -0.57
LSM5-207ENST00000410044 ZNF98A6NK75 572 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 COX7A2P2O60397 106 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 SAP30O75446 220 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 IGLL1P15814 213 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 M6PRP20645 277 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 ACOT6Q3I5F7 207 aaPredicted RBP11.5□□□□□ -0.57
LSM5-207ENST00000410044 C10orf113Q5VZT2 155 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 ST8SIA2Q92186 375 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 GRAMD2BQ96HH9 432 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 SH3BGRL3Q9H299 93 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 SLC25A32Q9H2D1 315 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 DOK5Q9P104 306 aa11.5□□□□□ -0.57
LSM5-207ENST00000410044 TRAV25A0A0B4J276 109 aa11.49□□□□□ -0.57
LSM5-207ENST00000410044 BOLA2-SMG1P6H3BVE0 249 aa11.49□□□□□ -0.57
LSM5-207ENST00000410044 MBP02144 154 aa11.49□□□□□ -0.57
LSM5-207ENST00000410044 LINC00305Q7Z4B0 112 aa11.49□□□□□ -0.57
LSM5-207ENST00000410044 IGHV3-49A0A0A0MS15 119 aa11.48□□□□□ -0.57
LSM5-207ENST00000410044 GCSAMLQ5JQS6 135 aa11.48□□□□□ -0.57
LSM5-207ENST00000410044 GPR82Q96P67 336 aa11.48□□□□□ -0.57
LSM5-207ENST00000410044 UHRF2Q96PU4 802 aa11.48□□□□□ -0.57
LSM5-207ENST00000410044 MRPL32Q9BYC8 188 aaKnown RBP11.48□□□□□ -0.57
LSM5-207ENST00000410044 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
LSM5-207ENST00000410044 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
LSM5-207ENST00000410044 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
LSM5-207ENST00000410044 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
LSM5-207ENST00000410044 CD300EQ496F6 205 aaPredicted RBP11.47□□□□□ -0.57
LSM5-207ENST00000410044 SAMD5Q5TGI4 173 aa11.47□□□□□ -0.57
LSM5-207ENST00000410044 FAM78BQ5VT40 261 aa11.47□□□□□ -0.57
LSM5-207ENST00000410044 MORN5Q5VZ52 161 aa11.47□□□□□ -0.57
LSM5-207ENST00000410044 DYNLRB2Q8TF09 96 aa11.47□□□□□ -0.57
LSM5-207ENST00000410044 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
LSM5-207ENST00000410044 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
LSM5-207ENST00000410044 FUT9Q9Y231 359 aa11.47□□□□□ -0.57
LSM5-207ENST00000410044 CMYA5Q8N3K9 4069 aa11.46□□□□□ -0.57
LSM5-207ENST00000410044 DNHD1Q96M86 4753 aa11.46□□□□□ -0.57
LSM5-207ENST00000410044 IGHV3-66A0A0C4DH42 116 aa11.46□□□□□ -0.57
LSM5-207ENST00000410044 HELTA6NFD8 242 aa11.46□□□□□ -0.57
LSM5-207ENST00000410044 UMAD1C9J7I0 102 aa11.46□□□□□ -0.57
LSM5-207ENST00000410044 TSPAN4O14817 238 aa11.46□□□□□ -0.57
LSM5-207ENST00000410044 MRPS12O15235 138 aaKnown RBP11.46□□□□□ -0.57
LSM5-207ENST00000410044 RHOBP62745 196 aa11.46□□□□□ -0.57
LSM5-207ENST00000410044 TMEM41BQ5BJD5 291 aa11.46□□□□□ -0.57
LSM5-207ENST00000410044 EIF5AL1Q6IS14 154 aaKnown RBP11.46□□□□□ -0.57
LSM5-207ENST00000410044 TCF24Q7RTU0 167 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms