RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OR2T35Q8NGX2 323 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 OR52E5Q8NH55 327 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 VSTM2AQ8TAG5 236 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 PPP1R1CQ8WVI7 109 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 GTSF1Q8WW33 167 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 PPP1R14BQ96C90 147 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 MRPL53Q96EL3 112 aaKnown RBP3.07□□□□□ -1.92
CLK1-203ENST00000409769 RBM14Q96PK6 669 aaKnown RBP3.07□□□□□ -1.92
CLK1-203ENST00000409769 TSNAXQ99598 290 aaKnown RBP3.07□□□□□ -1.92
CLK1-203ENST00000409769 PAXXQ9BUH6 204 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 PDCD10Q9BUL8 212 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 RNF126Q9BV68 326 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 CHIAQ9BZP6 476 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 FBXL15Q9H469 300 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 YAE1D1Q9NRH1 226 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.07□□□□□ -1.92
CLK1-203ENST00000409769 METTL1Q9UBP6 276 aaKnown RBP3.07□□□□□ -1.92
CLK1-203ENST00000409769 ZNF257Q9Y2Q1 563 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 SIGLEC9Q9Y336 463 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 IGHV7-81A0A0B4J1V7 117 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 TEX50A0A1B0GTY4 177 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 HMSDA8MTL9 139 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 H3BUX3 64 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 FCN1O00602 326 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 FGF16O43320 207 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 SYNGR2O43760 224 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 CHST1O43916 411 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 PFDN1O60925 122 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 TSC22D2O75157 780 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 DEDDO75618 318 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 TMEM50AO95807 157 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 HLA-DRB1P01911 266 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 SLC25A4P12235 298 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 PSMB6P28072 239 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 MAS1LP35410 378 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 VDAC2P45880 294 aaPredicted RBP3.06□□□□□ -1.92
CLK1-203ENST00000409769 MFAP2P55001 183 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 OR2B8PP59922 312 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 SPCS3P61009 180 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 HSPE1P61604 102 aaKnown RBP3.06□□□□□ -1.92
CLK1-203ENST00000409769 POLR2GP62487 172 aaKnown RBP eCLIP3.06□□□□□ -1.92
CLK1-203ENST00000409769 RPL8P62917 257 aaKnown RBP3.06□□□□□ -1.92
CLK1-203ENST00000409769 NDPQ00604 133 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 PRCDQ00LT1 54 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 TNFRSF9Q07011 255 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 FGL1Q08830 312 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 PJVKQ0ZLH3 352 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 KLF5Q13887 457 aaPredicted RBP3.06□□□□□ -1.92
CLK1-203ENST00000409769 HES1Q14469 280 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 MMDQ15546 238 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 C5orf64Q2M2E5 130 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 BSXQ3C1V8 233 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 C10orf55Q5SWW7 151 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 PVRIGQ6DKI7 326 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 PRSS54Q6PEW0 395 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 PPP1R27Q86WC6 154 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 LINC00518Q8N0U6 118 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 TMEM86BQ8N661 226 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 C5orf56Q8N8D9 126 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 OR5B3Q8NH48 314 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 OR4A16Q8NH70 328 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 OR1S1Q8NH92 325 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 RNASE11Q8TAA1 199 aaKnown RBP3.06□□□□□ -1.92
CLK1-203ENST00000409769 RNASE8Q8TDE3 154 aaKnown RBP3.06□□□□□ -1.92
CLK1-203ENST00000409769 C22orf15Q8WYQ4 148 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 NSD1Q96L73 2696 aaPredicted RBP3.06□□□□□ -1.92
CLK1-203ENST00000409769 RBKSQ9H477 322 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 ZNF430Q9H8G1 570 aaPredicted RBP3.06□□□□□ -1.92
CLK1-203ENST00000409769 NDUFA4L2Q9NRX3 87 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 OR5AC2Q9NZP5 309 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 GSKIPQ9P0R6 139 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 MBD2Q9UBB5 411 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 Q9UF83 564 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 PRNDQ9UKY0 176 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 TNFSF18Q9UNG2 199 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 CELA1Q9UNI1 258 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 WSB1Q9Y6I7 421 aa3.06□□□□□ -1.92
CLK1-203ENST00000409769 IGLC7A0M8Q6 106 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 RNF222A6NCQ9 220 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 BOLA2-SMG1P6H3BVE0 249 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 CLDN34H7C241 214 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 M0QZK8 103 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 MED6O75586 246 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 SNAPC5O75971 98 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 CA2P00918 260 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 PET100P0DJ07 73 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 HNF1AP20823 631 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 P2RY1P47900 373 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 TAS2R30P59541 319 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 S100A10P60903 97 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 LYZP61626 148 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 HERV-K104P63124 156 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 WT1-ASQ06250 92 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 ZNF345Q14585 488 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 LY6EQ16553 131 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 ZNF674Q2M3X9 581 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 KLK9Q2XQG4 91 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 LAMTOR1Q6IAA8 161 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 TMEM14EPQ6UXP3 125 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 ZNF562Q6V9R5 426 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms