RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 CST7O76096 145 aa23.06■■□□□ 1.28
TRAF3IP1-203ENST00000409739 AP2S1P53680 142 aaPredicted RBP23.06■■□□□ 1.28
TRAF3IP1-203ENST00000409739 H2BFSP57053 126 aa23.05■■□□□ 1.28
TRAF3IP1-203ENST00000409739 DEFB131AP59861 70 aa23.05■■□□□ 1.28
TRAF3IP1-203ENST00000409739 SLC38A11Q08AI6 406 aa23.05■■□□□ 1.28
TRAF3IP1-203ENST00000409739 PPP1R14BQ96C90 147 aa23.05■■□□□ 1.28
TRAF3IP1-203ENST00000409739 IGSF23A1L1A6 192 aa23.04■■□□□ 1.28
TRAF3IP1-203ENST00000409739 TEPPQ6URK8 271 aa23.04■■□□□ 1.28
TRAF3IP1-203ENST00000409739 SLC45A2Q9UMX9 530 aa23.04■■□□□ 1.28
TRAF3IP1-203ENST00000409739 RPL35AP18077 110 aaKnown RBP23.03■■□□□ 1.28
TRAF3IP1-203ENST00000409739 ORM2P19652 201 aa23.03■■□□□ 1.28
TRAF3IP1-203ENST00000409739 C1orf194Q5T5A4 169 aa23.03■■□□□ 1.28
TRAF3IP1-203ENST00000409739 TMEM252Q8N6L7 170 aa23.03■■□□□ 1.28
TRAF3IP1-203ENST00000409739 TMEM217Q8N7C4 229 aa23.03■■□□□ 1.28
TRAF3IP1-203ENST00000409739 NRN1Q9NPD7 142 aa23.03■■□□□ 1.28
TRAF3IP1-203ENST00000409739 ZNF688P0C7X2 276 aa23.02■■□□□ 1.28
TRAF3IP1-203ENST00000409739 SELENOTP62341 195 aa23.02■■□□□ 1.28
TRAF3IP1-203ENST00000409739 LRRC37A5PQ49AS3 106 aa23.02■■□□□ 1.28
TRAF3IP1-203ENST00000409739 LEMD1Q68G75 181 aa23.02■■□□□ 1.28
TRAF3IP1-203ENST00000409739 OR1B1Q8NGR6 318 aa23.02■■□□□ 1.28
TRAF3IP1-203ENST00000409739 SULT1A1P50225 295 aa23.01■■□□□ 1.27
TRAF3IP1-203ENST00000409739 APOC4P55056 127 aa23.01■■□□□ 1.27
TRAF3IP1-203ENST00000409739 CYCSP99999 105 aaKnown RBP23.01■■□□□ 1.27
TRAF3IP1-203ENST00000409739 FBXL17Q9UF56 701 aa23.01■■□□□ 1.27
TRAF3IP1-203ENST00000409739 ALG5Q9Y673 324 aa23.01■■□□□ 1.27
TRAF3IP1-203ENST00000409739 LINC00869P0C866 280 aa23■■□□□ 1.27
TRAF3IP1-203ENST00000409739 STX12Q86Y82 276 aa23■■□□□ 1.27
TRAF3IP1-203ENST00000409739 TMEM147Q9BVK8 224 aa23■■□□□ 1.27
TRAF3IP1-203ENST00000409739 OR5AC2Q9NZP5 309 aa23■■□□□ 1.27
TRAF3IP1-203ENST00000409739 DOK5Q9P104 306 aa23■■□□□ 1.27
TRAF3IP1-203ENST00000409739 PLP1P60201 277 aa22.99■■□□□ 1.27
TRAF3IP1-203ENST00000409739 KIR2DL5BA0A0G2JN68 375 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 KIR2DL5BA0A0G2JPC4 375 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 ZNF98A6NK75 572 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 H0YIZ8 118 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 AGPAT2O15120 278 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 ZNF546Q86UE3 836 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 OR8I2Q8N0Y5 310 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 KIR2DL5AQ8N109 375 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 KIR2DL5BQ8NHK3 375 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 MGST2Q99735 147 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 UQCC1Q9NVA1 299 aa22.98■■□□□ 1.27
TRAF3IP1-203ENST00000409739 RLN2P04090 185 aa22.97■■□□□ 1.27
TRAF3IP1-203ENST00000409739 VWC2Q2TAL6 325 aa22.97■■□□□ 1.27
TRAF3IP1-203ENST00000409739 PPP1R1CQ8WVI7 109 aa22.97■■□□□ 1.27
TRAF3IP1-203ENST00000409739 SLC25A32Q9H2D1 315 aa22.97■■□□□ 1.27
TRAF3IP1-203ENST00000409739 SLC25A22Q9H936 323 aa22.97■■□□□ 1.27
TRAF3IP1-203ENST00000409739 E5RGE8 158 aa22.96■■□□□ 1.27
TRAF3IP1-203ENST00000409739 S100A11P31949 105 aa22.96■■□□□ 1.27
TRAF3IP1-203ENST00000409739 HBG1P69891 147 aa22.96■■□□□ 1.27
TRAF3IP1-203ENST00000409739 HBG2P69892 147 aa22.96■■□□□ 1.27
TRAF3IP1-203ENST00000409739 HIGD1AQ9Y241 93 aa22.96■■□□□ 1.27
TRAF3IP1-203ENST00000409739 H3BRN7 92 aa22.95■■□□□ 1.26
TRAF3IP1-203ENST00000409739 HYPMO75409 117 aa22.95■■□□□ 1.26
TRAF3IP1-203ENST00000409739 PSMG4Q5JS54 123 aa22.95■■□□□ 1.26
TRAF3IP1-203ENST00000409739 SCRT1Q9BWW7 348 aa22.95■■□□□ 1.26
TRAF3IP1-203ENST00000409739 SLC25A39Q9BZJ4 359 aaPredicted RBP22.95■■□□□ 1.26
TRAF3IP1-203ENST00000409739 SEPSECSQ9HD40 501 aaKnown RBP22.95■■□□□ 1.26
TRAF3IP1-203ENST00000409739 UBE2L5PA0A1B0GUS4 154 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 UBE2CO00762 179 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 S100A7P31151 101 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 RAP2BP61225 183 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 Q6ZWC4 215 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 OVOL2Q9BRP0 275 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 ARL6Q9H0F7 186 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 EDA2RQ9HAV5 297 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 WDR83OSQ9Y284 106 aa22.94■■□□□ 1.26
TRAF3IP1-203ENST00000409739 OR5G3P0C626 314 aa22.93■■□□□ 1.26
TRAF3IP1-203ENST00000409739 SNRPD3P62318 126 aaKnown RBP22.93■■□□□ 1.26
TRAF3IP1-203ENST00000409739 EWSR1Q01844 656 aaKnown RBP eCLIP22.93■■□□□ 1.26
TRAF3IP1-203ENST00000409739 DEFB135Q30KP9 77 aa22.93■■□□□ 1.26
TRAF3IP1-203ENST00000409739 SHANK2-AS3Q9BTD1 123 aa22.93■■□□□ 1.26
TRAF3IP1-203ENST00000409739 DNAH7Q8WXX0 4024 aa22.92■■□□□ 1.26
TRAF3IP1-203ENST00000409739 KNCNA6PVL3 124 aa22.92■■□□□ 1.26
TRAF3IP1-203ENST00000409739 SOCS3O14543 225 aa22.92■■□□□ 1.26
TRAF3IP1-203ENST00000409739 STHQ8IWL8 128 aa22.92■■□□□ 1.26
TRAF3IP1-203ENST00000409739 UHRF2Q96PU4 802 aa22.92■■□□□ 1.26
TRAF3IP1-203ENST00000409739 SLC25A31Q9H0C2 315 aa22.92■■□□□ 1.26
TRAF3IP1-203ENST00000409739 MPC2O95563 127 aa22.91■■□□□ 1.26
TRAF3IP1-203ENST00000409739 GALR1P47211 349 aa22.91■■□□□ 1.26
TRAF3IP1-203ENST00000409739 CAMLGP49069 296 aa22.91■■□□□ 1.26
TRAF3IP1-203ENST00000409739 NHLH2Q02577 135 aa22.91■■□□□ 1.26
TRAF3IP1-203ENST00000409739 PXDC1Q5TGL8 231 aa22.91■■□□□ 1.26
TRAF3IP1-203ENST00000409739 PATE2Q6UY27 113 aa22.91■■□□□ 1.26
TRAF3IP1-203ENST00000409739 CSTL1Q9H114 145 aa22.91■■□□□ 1.26
TRAF3IP1-203ENST00000409739 CXCL3P19876 107 aa22.9■■□□□ 1.26
TRAF3IP1-203ENST00000409739 RAB31Q13636 194 aa22.9■■□□□ 1.26
TRAF3IP1-203ENST00000409739 ATP6V1FQ16864 119 aa22.9■■□□□ 1.26
TRAF3IP1-203ENST00000409739 GPR82Q96P67 336 aa22.9■■□□□ 1.26
TRAF3IP1-203ENST00000409739 RNF126Q9BV68 326 aa22.9■■□□□ 1.26
TRAF3IP1-203ENST00000409739 ARV1Q9H2C2 271 aa22.9■■□□□ 1.26
TRAF3IP1-203ENST00000409739 TP53TG1Q9Y2A0 90 aa22.9■■□□□ 1.26
TRAF3IP1-203ENST00000409739 PET100P0DJ07 73 aa22.89■■□□□ 1.25
TRAF3IP1-203ENST00000409739 BAXQ07812 192 aa22.89■■□□□ 1.25
TRAF3IP1-203ENST00000409739 TRPT1Q86TN4 253 aaKnown RBP22.89■■□□□ 1.25
TRAF3IP1-203ENST00000409739 C17orf77Q96MU5 243 aa22.89■■□□□ 1.25
TRAF3IP1-203ENST00000409739 PSMB3P49720 205 aa22.88■■□□□ 1.25
TRAF3IP1-203ENST00000409739 RGS21Q2M5E4 152 aa22.88■■□□□ 1.25
TRAF3IP1-203ENST00000409739 ACTL10Q5JWF8 245 aa22.88■■□□□ 1.25
TRAF3IP1-203ENST00000409739 OR5C1Q8NGR4 320 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms