RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 Q8NA96 180 aa3.83□□□□□ -1.8
PCDH11X-207ENST00000406881 LYPD6BQ8NI32 183 aa3.83□□□□□ -1.8
PCDH11X-207ENST00000406881 DUX5Q96PT3 197 aa3.83□□□□□ -1.8
PCDH11X-207ENST00000406881 COL6A6A6NMZ7 2263 aa3.83□□□□□ -1.8
PCDH11X-207ENST00000406881 OTOGLQ3ZCN5 2332 aa3.83□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV1-69DA0A0B4J2H0 117 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 UBE2CO00762 179 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 LY6HO94772 140 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 NDUFB8O95169 186 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV1-69P01742 117 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 TCRAP04437 139 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 ASIPP42127 132 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 DAZAP2Q15038 168 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 DGAT2L7PQ6IED9 249 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 HAPLN4Q86UW8 402 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 DMRTC2Q8IXT2 367 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 SHANK2-AS3Q9BTD1 123 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 CTSZQ9UBR2 303 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 RFNGQ9Y644 331 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 DIDO1Q9BTC0 2240 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 PKDREJQ9NTG1 2253 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 NPIPB5A8MRT5 1133 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 H3BUX3 64 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 CIDEAO60543 219 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 ADCYAP1P18509 176 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 GNG5P63218 68 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 KIAA1644Q3SXP7 199 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 PET117Q6UWS5 81 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 C9orf139Q6ZV77 190 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 THAP8Q8NA92 274 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 FER1L6-AS1Q8NA97 138 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 OR11H6Q8NGC7 330 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 JKAMPQ9P055 326 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 CGB1A6NKQ9 187 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 HIGD1CA8MV81 97 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 FSTL3O95633 263 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 PPBPP02775 128 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 SP5Q6BEB4 398 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 FAM53AQ6NSI3 398 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 TMEM136Q6ZRR5 245 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 KCNS1Q96KK3 526 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 NDUFAF3Q9BU61 184 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 SCRT1Q9BWW7 348 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 RNASE7Q9H1E1 156 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 AP5S1Q9NUS5 200 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 PAM16Q9Y3D7 125 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 CADP27708 2225 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 CCDC168Q8NDH2 2452 aa3.82□□□□□ -1.8
PCDH11X-207ENST00000406881 NCOA6Q14686 2063 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV3OR16-13A0A075B7E8 117 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV3-74A0A0B4J1X5 117 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 TRAV21A0A0B4J279 112 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 C5orf52A6NGY3 159 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 NPIPB6E9PJ23 425 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF207O43670 478 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 LEPP41159 167 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 CMC4P56277 68 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 NUTF2P61970 127 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 CACNG7P62955 275 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 CRIP3Q6Q6R5 217 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 OR8A1Q8NGG7 326 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 C14orf144Q96I85 54 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 KLF2Q9Y5W3 355 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 COL5A1P20908 1838 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 ZFHX2Q9C0A1 2572 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV3-49A0A0A0MS15 119 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 GRIFINA4D1Z8 144 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 IFITM10A6NMD0 228 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 F2Z2F3 143 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 INS-IGF2F8WCM5 200 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 SMAD7O15105 426 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV3-11P01762 117 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 IGHV2-5P01817 119 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 ADORA2A-AS1P86434 159 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 DTX2Q86UW9 622 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 NUDT10Q8NFP7 164 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 NUDT11Q96G61 164 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PRELID3AQ96N28 172 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 LINC00574Q9H8X3 128 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 YAE1D1Q9NRH1 226 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 TMEM14CQ9P0S9 112 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNRD1Q9P1U0 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 MED13Q9UHV7 2174 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 LOC389332A0A1B0GUA5 103 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 C22orf46C9J442 243 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 C9JQL5 133 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 H7C1H1 209 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BKO60814 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BJP06899 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 SOD3P08294 240 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BOP23527 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BBP33778 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BDP58876 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST1H2BCP62807 126 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PRR20EP86478 221 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PRR20CP86479 221 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PRR20DP86480 221 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PRR20BP86481 221 aa3.81□□□□□ -1.8
PCDH11X-207ENST00000406881 PRR20AP86496 221 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms