RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 METTL26Q96S19 204 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 RNF2Q99496 336 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 PARD6GQ9BYG4 376 aaPredicted RBP12.04□□□□□ -0.48
HMGA1-204ENST00000401473 ARL6Q9H0F7 186 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 DOK5Q9P104 306 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 IZUMO1RA6ND01 250 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 BUB3O43684 328 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 CD300EQ496F6 205 aaPredicted RBP12.04□□□□□ -0.48
HMGA1-204ENST00000401473 MARC2Q969Z3 335 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 UHRF2Q96PU4 802 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 VSIRQ9H7M9 311 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 SLC39A9Q9NUM3 307 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 RABAC1Q9UI14 185 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
HMGA1-204ENST00000401473 B2MP61769 119 aa12.03□□□□□ -0.48
HMGA1-204ENST00000401473 ZNF266Q14584 549 aa12.03□□□□□ -0.48
HMGA1-204ENST00000401473 GCSAMLQ5JQS6 135 aa12.03□□□□□ -0.48
HMGA1-204ENST00000401473 SCGB1C1Q8TD33 95 aa12.03□□□□□ -0.48
HMGA1-204ENST00000401473 A0A0D9SG52 128 aa12.02□□□□□ -0.48
HMGA1-204ENST00000401473 HNRNPCP07910 306 aaKnown RBP eCLIP12.02□□□□□ -0.48
HMGA1-204ENST00000401473 ZFP69Q49AA0 526 aa12.02□□□□□ -0.48
HMGA1-204ENST00000401473 LAMTOR1Q6IAA8 161 aa12.02□□□□□ -0.48
HMGA1-204ENST00000401473 HSD17B11Q8NBQ5 300 aa12.02□□□□□ -0.48
HMGA1-204ENST00000401473 TAAR5O14804 337 aa12.02□□□□□ -0.49
HMGA1-204ENST00000401473 HYPMO75409 117 aa12.02□□□□□ -0.49
HMGA1-204ENST00000401473 OR5G3P0C626 314 aa12.02□□□□□ -0.49
HMGA1-204ENST00000401473 NKX2-5P52952 324 aaPredicted RBP12.02□□□□□ -0.49
HMGA1-204ENST00000401473 Q6ZRG5 221 aa12.02□□□□□ -0.49
HMGA1-204ENST00000401473 TMUB2Q71RG4 321 aa12.02□□□□□ -0.49
HMGA1-204ENST00000401473 ARV1Q9H2C2 271 aa12.02□□□□□ -0.49
HMGA1-204ENST00000401473 MORN5Q5VZ52 161 aa12.01□□□□□ -0.49
HMGA1-204ENST00000401473 FAM90A2PQ658T7 463 aa12.01□□□□□ -0.49
HMGA1-204ENST00000401473 LEMD1Q68G75 181 aa12.01□□□□□ -0.49
HMGA1-204ENST00000401473 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
HMGA1-204ENST00000401473 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
HMGA1-204ENST00000401473 DYNLRB2Q8TF09 96 aa12.01□□□□□ -0.49
HMGA1-204ENST00000401473 ARPC5LQ9BPX5 153 aa12.01□□□□□ -0.49
HMGA1-204ENST00000401473 DNAJC4Q9NNZ3 241 aa12.01□□□□□ -0.49
HMGA1-204ENST00000401473 TECRQ9NZ01 308 aaKnown RBP12.01□□□□□ -0.49
HMGA1-204ENST00000401473 PFDN1O60925 122 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 JTBO76095 146 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 ATP6V0CP27449 155 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 KRTAP10-11P60412 298 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 SLC25A39Q9BZJ4 359 aaPredicted RBP12□□□□□ -0.49
HMGA1-204ENST00000401473 SH3BGRL3Q9H299 93 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 A0A1W2PS18 150 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 ZNF98A6NK75 572 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 BEAN1Q3B7T3 259 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 C16orf54Q6UWD8 224 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 C9orf62Q8N4C0 152 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 HIGD1AQ9Y241 93 aa12□□□□□ -0.49
HMGA1-204ENST00000401473 ELOA3CA0A087WX78 387 aaPredicted RBP11.99□□□□□ -0.49
HMGA1-204ENST00000401473 ZNF785A8K8V0 405 aa11.99□□□□□ -0.49
HMGA1-204ENST00000401473 C17orf112F2Z3M2 114 aa11.99□□□□□ -0.49
HMGA1-204ENST00000401473 EGFEM1PQ0D2K5 195 aa11.99□□□□□ -0.49
HMGA1-204ENST00000401473 PXDC1Q5TGL8 231 aa11.99□□□□□ -0.49
HMGA1-204ENST00000401473 LINC00305Q7Z4B0 112 aa11.99□□□□□ -0.49
HMGA1-204ENST00000401473 GLMPQ8WWB7 406 aa11.99□□□□□ -0.49
HMGA1-204ENST00000401473 SCRT1Q9BWW7 348 aa11.99□□□□□ -0.49
HMGA1-204ENST00000401473 BORCS7-ASMTA0A0B4J1R7 106 aa11.98□□□□□ -0.49
HMGA1-204ENST00000401473 H3BRN7 92 aa11.98□□□□□ -0.49
HMGA1-204ENST00000401473 BCL2L11O43521 198 aa11.98□□□□□ -0.49
HMGA1-204ENST00000401473 COX7A2P2O60397 106 aa11.98□□□□□ -0.49
HMGA1-204ENST00000401473 KPRPQ5T749 579 aaPredicted RBP11.98□□□□□ -0.49
HMGA1-204ENST00000401473 SHANK2-AS3Q9BTD1 123 aa11.98□□□□□ -0.49
HMGA1-204ENST00000401473 SLC25A22Q9H936 323 aa11.98□□□□□ -0.49
HMGA1-204ENST00000401473 SEPSECSQ9HD40 501 aaKnown RBP11.98□□□□□ -0.49
HMGA1-204ENST00000401473 IGKV3-7A0A075B6H7 116 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 KANTRA0A1W2PQU2 76 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 FFAR4Q5NUL3 377 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 C10orf113Q5VZT2 155 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 TCF24Q7RTU0 167 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 PPP1R14BQ96C90 147 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 GPR61Q9BZJ8 451 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 TIMM9Q9Y5J7 89 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 GATAD1Q8WUU5 269 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 NARS2Q96I59 477 aaKnown RBP11.97□□□□□ -0.49
HMGA1-204ENST00000401473 ZNF471Q9BX82 626 aaPredicted RBP11.97□□□□□ -0.49
HMGA1-204ENST00000401473 SLC25A32Q9H2D1 315 aa11.97□□□□□ -0.49
HMGA1-204ENST00000401473 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 TSPAN4O14817 238 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 PRB2P02812 416 aaPredicted RBP11.96□□□□□ -0.49
HMGA1-204ENST00000401473 C1orf194Q5T5A4 169 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 RBPMS2Q6ZRY4 209 aaKnown RBP11.96□□□□□ -0.49
HMGA1-204ENST00000401473 OR8I2Q8N0Y5 310 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 GBGT1Q8N5D6 347 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 OR1L4Q8NGR5 311 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 C17orf77Q96MU5 243 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 PSMG3Q9BT73 122 aaPredicted RBP11.96□□□□□ -0.49
HMGA1-204ENST00000401473 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.49
HMGA1-204ENST00000401473 RPL11P62913 178 aaKnown RBP11.95□□□□□ -0.5
HMGA1-204ENST00000401473 FAM78BQ5VT40 261 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 SPATA31B1PQ5VZV4 182 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 OR2K2Q8NGT1 345 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 OR2G3Q8NGZ4 309 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 GNPNAT1Q96EK6 184 aaPredicted RBP11.95□□□□□ -0.5
HMGA1-204ENST00000401473 PFDN5Q99471 154 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 TMEM231Q9H6L2 316 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 KCNIP2Q9NS61 270 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms