RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 HOXB1P14653 301 aaPredicted RBP7.74□□□□□ -1.17
ATL3-201ENST00000398868 CD200R1LQ6Q8B3 271 aa7.74□□□□□ -1.17
ATL3-201ENST00000398868 TRAV30A0A087WSZ9 112 aa7.74□□□□□ -1.17
ATL3-201ENST00000398868 NPIPB13A6NJU9 1138 aa7.74□□□□□ -1.17
ATL3-201ENST00000398868 NPIPB5A8MRT5 1133 aa7.74□□□□□ -1.17
ATL3-201ENST00000398868 NRGNQ92686 78 aa7.74□□□□□ -1.17
ATL3-201ENST00000398868 ST20Q9HBF5 79 aa7.74□□□□□ -1.17
ATL3-201ENST00000398868 MYLKQ15746 1914 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 A0A1W2PRE2 83 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 NR2C2APQ86WQ0 139 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 NXT2Q9NPJ8 142 aaKnown RBP7.73□□□□□ -1.17
ATL3-201ENST00000398868 LRRC37AA6NMS7 1700 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 COLCA2A8K830 154 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 IGHV1-46P01743 117 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 ATXN8Q156A1 80 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 IMMP1LQ96LU5 166 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 NBR2O15453 112 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 FCN3O75636 299 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 NAPSAO96009 420 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 CD28P10747 220 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 BTCP35070 178 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 ZNF474Q6S9Z5 364 aaPredicted RBP7.73□□□□□ -1.17
ATL3-201ENST00000398868 LYPD2Q6UXB3 125 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 KLHDC3Q9BQ90 382 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 PKIBQ9C010 78 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 MBD3L4A6NDZ8 208 aaPredicted RBP7.73□□□□□ -1.17
ATL3-201ENST00000398868 MBD3L3A6NE82 208 aaPredicted RBP7.73□□□□□ -1.17
ATL3-201ENST00000398868 MBD3L5A6NJ08 208 aaPredicted RBP7.73□□□□□ -1.17
ATL3-201ENST00000398868 MBD3L2Q8NHZ7 208 aaPredicted RBP7.73□□□□□ -1.17
ATL3-201ENST00000398868 LAMTOR3Q9UHA4 124 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 PTPRDP23468 1912 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 PRSS57Q6UWY2 283 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 IGHV3-16A0A0C4DH30 117 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 FAM90A26D6RGX4 464 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 HSD52Q0P140 79 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 C1orf100Q5SVJ3 147 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 SS18L2Q9UHA2 77 aa7.73□□□□□ -1.17
ATL3-201ENST00000398868 C9JAW5 83 aa7.72□□□□□ -1.17
ATL3-201ENST00000398868 SMKR1H3BMG3 65 aa7.72□□□□□ -1.17
ATL3-201ENST00000398868 SEPSECSQ9HD40 501 aaKnown RBP7.72□□□□□ -1.17
ATL3-201ENST00000398868 HOXD3P31249 432 aaPredicted RBP7.72□□□□□ -1.17
ATL3-201ENST00000398868 IFI27L2Q9H2X8 130 aa7.72□□□□□ -1.17
ATL3-201ENST00000398868 TSSC4Q9Y5U2 329 aaPredicted RBP7.72□□□□□ -1.17
ATL3-201ENST00000398868 WNT2P09544 360 aa7.72□□□□□ -1.17
ATL3-201ENST00000398868 CCL1P22362 96 aa7.72□□□□□ -1.17
ATL3-201ENST00000398868 TIMP3P35625 211 aa7.72□□□□□ -1.17
ATL3-201ENST00000398868 PAPPA-AS1Q5QFB9 102 aa7.72□□□□□ -1.17
ATL3-201ENST00000398868 CST9LQ9H4G1 147 aa7.72□□□□□ -1.17
ATL3-201ENST00000398868 RPUSD1Q9UJJ7 312 aaKnown RBP7.72□□□□□ -1.17
ATL3-201ENST00000398868 IGLV2-23P01705 113 aa7.71□□□□□ -1.17
ATL3-201ENST00000398868 CGB7P0DN87 165 aa7.71□□□□□ -1.17
ATL3-201ENST00000398868 CTHRC1Q96CG8 243 aa7.71□□□□□ -1.17
ATL3-201ENST00000398868 LYZL4Q96KX0 146 aa7.71□□□□□ -1.17
ATL3-201ENST00000398868 TMEM14DPA8MWL7 114 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 SRSF1Q07955 248 aaKnown RBP eCLIP7.71□□□□□ -1.18
ATL3-201ENST00000398868 TMEM200BQ69YZ2 307 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 IFI27P40305 119 aaPredicted RBP7.71□□□□□ -1.18
ATL3-201ENST00000398868 C1orf194Q5T5A4 169 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 D6R8Y8 96 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 ATP5L2Q7Z4Y8 100 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 ZNF319Q9P2F9 582 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 H0YIZ8 118 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 MST1P26927 711 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 SSC4DQ8WTU2 575 aa7.71□□□□□ -1.18
ATL3-201ENST00000398868 IGKV1D-13A0A0B4J2D9 117 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 TOMM40O96008 361 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 IGKV1-13P0DP09 117 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 SEC11AP67812 179 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 C15orf32Q32M92 178 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 PIP4P2Q8N4L2 257 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 TMEM133Q9H2Q1 129 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 CLPSP04118 112 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 SPATA31B1PQ5VZV4 182 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 EXOC3-AS1Q8N2X6 119 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 STPG4Q8N801 248 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 IFNL4K9M1U5 179 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 ITGB1BP1O14713 200 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 PLNP26678 52 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 ANXA2RQ3ZCQ2 193 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 RIPPLY2Q5TAB7 128 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 MRPL14Q6P1L8 145 aaKnown RBP7.7□□□□□ -1.18
ATL3-201ENST00000398868 E9PLN8 166 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 SYNJ2BPP57105 145 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 PAX8Q06710 450 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 LINC01590Q5TEZ4 76 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 CLPSL2Q6UWE3 100 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 RALGAPA2Q2PPJ7 1873 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 KNCNA6PVL3 124 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 TCRAP04437 139 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 HGFACQ04756 655 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 C18orf12Q96KH6 178 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 GNB1LQ9BYB4 327 aa7.7□□□□□ -1.18
ATL3-201ENST00000398868 SPTAN1Q13813 2472 aaKnown RBP7.7□□□□□ -1.18
ATL3-201ENST00000398868 LY6G6FQ5SQ64 297 aa7.69□□□□□ -1.18
ATL3-201ENST00000398868 SUMO4Q6EEV6 95 aa7.69□□□□□ -1.18
ATL3-201ENST00000398868 ADAMTS9Q9P2N4 1935 aa7.69□□□□□ -1.18
ATL3-201ENST00000398868 C5orf63A6NC05 138 aa7.69□□□□□ -1.18
ATL3-201ENST00000398868 FAM231BA6NCW3 169 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms