RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 LINC00869P0C866 280 aa15.79■□□□□ 0.12
TSPAN4-206ENST00000397408 ORM2P19652 201 aa15.79■□□□□ 0.12
TSPAN4-206ENST00000397408 SBSPONQ8IVN8 264 aa15.79■□□□□ 0.12
TSPAN4-206ENST00000397408 OR1B1Q8NGR6 318 aa15.79■□□□□ 0.12
TSPAN4-206ENST00000397408 RNF126Q9BV68 326 aa15.79■□□□□ 0.12
TSPAN4-206ENST00000397408 DOK5Q9P104 306 aa15.79■□□□□ 0.12
TSPAN4-206ENST00000397408 DNAH9Q9NYC9 4486 aa15.79■□□□□ 0.12
TSPAN4-206ENST00000397408 NHLH2Q02577 135 aa15.78■□□□□ 0.12
TSPAN4-206ENST00000397408 VWC2Q2TAL6 325 aa15.78■□□□□ 0.12
TSPAN4-206ENST00000397408 ZNF546Q86UE3 836 aa15.78■□□□□ 0.12
TSPAN4-206ENST00000397408 MGST2Q99735 147 aa15.78■□□□□ 0.12
TSPAN4-206ENST00000397408 MBD2Q9UBB5 411 aa15.78■□□□□ 0.12
TSPAN4-206ENST00000397408 WDR83OSQ9Y284 106 aa15.78■□□□□ 0.12
TSPAN4-206ENST00000397408 TRAV2A0A0B4J234 112 aa15.77■□□□□ 0.12
TSPAN4-206ENST00000397408 AGPAT2O15120 278 aa15.77■□□□□ 0.12
TSPAN4-206ENST00000397408 SIGLEC15Q6ZMC9 328 aa15.77■□□□□ 0.12
TSPAN4-206ENST00000397408 SLC45A2Q9UMX9 530 aa15.77■□□□□ 0.12
TSPAN4-206ENST00000397408 COL7A1Q02388 2944 aa15.77■□□□□ 0.11
TSPAN4-206ENST00000397408 BAXQ07812 192 aa15.77■□□□□ 0.11
TSPAN4-206ENST00000397408 ATP6V1FQ16864 119 aa15.77■□□□□ 0.11
TSPAN4-206ENST00000397408 OR5C1Q8NGR4 320 aa15.77■□□□□ 0.11
TSPAN4-206ENST00000397408 FAM110AQ9BQ89 295 aa15.77■□□□□ 0.11
TSPAN4-206ENST00000397408 MAP6D1Q9H9H5 199 aa15.77■□□□□ 0.11
TSPAN4-206ENST00000397408 RBMY1BA6NDE4 496 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-206ENST00000397408 RBMY1EA6NEQ0 496 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-206ENST00000397408 RBMY1DP0C7P1 496 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-206ENST00000397408 CAMLGP49069 296 aa15.76■□□□□ 0.11
TSPAN4-206ENST00000397408 AP2S1P53680 142 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-206ENST00000397408 C1orf194Q5T5A4 169 aa15.76■□□□□ 0.11
TSPAN4-206ENST00000397408 FAM24BQ8N5W8 94 aa15.76■□□□□ 0.11
TSPAN4-206ENST00000397408 CITED4Q96RK1 184 aa15.76■□□□□ 0.11
TSPAN4-206ENST00000397408 K7EQG2 157 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 HYPMO75409 117 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 NHLRC4P0CG21 123 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 PLP1P60201 277 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 RAP2BP61225 183 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 RAB31Q13636 194 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 CLINT1Q14677 625 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 DCANP1Q8TF63 244 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 GGTLC1Q9BX51 225 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 ARL6Q9H0F7 186 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 SLC25A22Q9H936 323 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 FBXL17Q9UF56 701 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 HIGD1AQ9Y241 93 aa15.75■□□□□ 0.11
TSPAN4-206ENST00000397408 OR5G3P0C626 314 aa15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 FGF7P21781 194 aa15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 S100A7P31151 101 aa15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 CMC4P56277 68 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 LINC00322Q6ZN03 302 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 APRG1Q8IVJ8 170 aa15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 OR8I2Q8N0Y5 310 aa15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 THAP6Q8TBB0 222 aa15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 NRN1Q9NPD7 142 aa15.74■□□□□ 0.11
TSPAN4-206ENST00000397408 ZNF98A6NK75 572 aa15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 H3BRN7 92 aa15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 GIPP09681 153 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 LYL1P12980 280 aa15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 RPL12P30050 165 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 ZNF124Q15973 351 aa15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 HAGHQ16775 308 aa15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 SCRT1Q9BWW7 348 aa15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 SLC25A39Q9BZJ4 359 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 HSPB11Q9Y547 144 aa15.73■□□□□ 0.11
TSPAN4-206ENST00000397408 ZNF688P0C7X2 276 aa15.72■□□□□ 0.11
TSPAN4-206ENST00000397408 DEFB131AP59861 70 aa15.72■□□□□ 0.11
TSPAN4-206ENST00000397408 LEMD1Q68G75 181 aa15.72■□□□□ 0.11
TSPAN4-206ENST00000397408 ASB13Q8WXK3 278 aa15.72■□□□□ 0.11
TSPAN4-206ENST00000397408 UHRF2Q96PU4 802 aa15.72■□□□□ 0.11
TSPAN4-206ENST00000397408 SLC25A32Q9H2D1 315 aa15.72■□□□□ 0.11
TSPAN4-206ENST00000397408 PXDC1Q5TGL8 231 aa15.71■□□□□ 0.11
TSPAN4-206ENST00000397408 MIC13Q5XKP0 118 aa15.71■□□□□ 0.11
TSPAN4-206ENST00000397408 PATE2Q6UY27 113 aa15.71■□□□□ 0.11
TSPAN4-206ENST00000397408 SHANK2-AS3Q9BTD1 123 aa15.71■□□□□ 0.11
TSPAN4-206ENST00000397408 ARV1Q9H2C2 271 aa15.71■□□□□ 0.11
TSPAN4-206ENST00000397408 LOC102724200A0A096LPH7 203 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-206ENST00000397408 MPDU1O75352 247 aa15.7■□□□□ 0.1
TSPAN4-206ENST00000397408 PRR20EP86478 221 aa15.7■□□□□ 0.1
TSPAN4-206ENST00000397408 PRR20CP86479 221 aa15.7■□□□□ 0.1
TSPAN4-206ENST00000397408 PRR20DP86480 221 aa15.7■□□□□ 0.1
TSPAN4-206ENST00000397408 PRR20BP86481 221 aa15.7■□□□□ 0.1
TSPAN4-206ENST00000397408 PRR20AP86496 221 aa15.7■□□□□ 0.1
TSPAN4-206ENST00000397408 OPCMLQ14982 345 aa15.7■□□□□ 0.1
TSPAN4-206ENST00000397408 COX7A2P2O60397 106 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 GALR1P47211 349 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 FGL1Q08830 312 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 S100A7AQ86SG5 101 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 ATP5SQ99766 215 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 TM2D3Q9BRN9 247 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 NPCDR1Q9BY65 106 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 SMIM3Q9BZL3 60 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 ZMAT4Q9H898 229 aa15.69■□□□□ 0.1
TSPAN4-206ENST00000397408 RPL29P47914 159 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 B2MP61769 119 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 Q5BKY6 102 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 Q6ZRG5 221 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 CHAC2Q8WUX2 184 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 GPR82Q96P67 336 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 SLC39A9Q9NUM3 307 aa15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 RPL35AP18077 110 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-206ENST00000397408 SNRPD3P62318 126 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9547.8 ms