RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 Q8N1Y9 231 aa14.4□□□□□ -0.1
HOXA9-202ENST00000396345 DOK5Q9P104 306 aa14.4□□□□□ -0.1
HOXA9-202ENST00000396345 MPDU1O75352 247 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 HYPMO75409 117 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 CD81P60033 236 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 PLP1P60201 277 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 PAFAH1B2P68402 229 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 STPG3Q8N7X2 389 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 GLMPQ8WWB7 406 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 ATP5SQ99766 215 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 NEURL2Q9BR09 285 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 GGTLC1Q9BX51 225 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 SMIM3Q9BZL3 60 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 ARL6Q9H0F7 186 aa14.39□□□□□ -0.11
HOXA9-202ENST00000396345 FXYD6-FXYD2A0A087WZ82 144 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 HELTA6NFD8 242 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 OR4C46A6NHA9 309 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 CD7P09564 240 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 OR5G3P0C626 314 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 S100A7P31151 101 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 PXDC1Q5TGL8 231 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 MIC13Q5XKP0 118 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 GBGT1Q8N5D6 347 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 AQP10Q96PS8 301 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 HIGD1AQ9Y241 93 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 SMAD5-AS1Q9Y6J3 95 aa14.38□□□□□ -0.11
HOXA9-202ENST00000396345 DNASE2O00115 360 aaPredicted RBP14.37□□□□□ -0.11
HOXA9-202ENST00000396345 RPL29P47914 159 aaKnown RBP14.37□□□□□ -0.11
HOXA9-202ENST00000396345 TFPI2P48307 235 aa14.37□□□□□ -0.11
HOXA9-202ENST00000396345 AP2S1P53680 142 aaPredicted RBP14.37□□□□□ -0.11
HOXA9-202ENST00000396345 OPCMLQ14982 345 aa14.37□□□□□ -0.11
HOXA9-202ENST00000396345 C1orf194Q5T5A4 169 aa14.37□□□□□ -0.11
HOXA9-202ENST00000396345 INO80EQ8NBZ0 244 aaPredicted RBP14.37□□□□□ -0.11
HOXA9-202ENST00000396345 NPCDR1Q9BY65 106 aa14.37□□□□□ -0.11
HOXA9-202ENST00000396345 MS4A6AQ9H2W1 248 aa14.37□□□□□ -0.11
HOXA9-202ENST00000396345 G3V3Q6 166 aa14.36□□□□□ -0.11
HOXA9-202ENST00000396345 SMLR1H3BR10 107 aa14.36□□□□□ -0.11
HOXA9-202ENST00000396345 IFNA5P01569 189 aa14.36□□□□□ -0.11
HOXA9-202ENST00000396345 SIGLEC15Q6ZMC9 328 aa14.36□□□□□ -0.11
HOXA9-202ENST00000396345 Q6ZRG5 221 aa14.36□□□□□ -0.11
HOXA9-202ENST00000396345 WFDC3Q8IUB2 231 aa14.36□□□□□ -0.11
HOXA9-202ENST00000396345 STXBP6Q8NFX7 210 aa14.36□□□□□ -0.11
HOXA9-202ENST00000396345 SLC25A39Q9BZJ4 359 aaPredicted RBP14.36□□□□□ -0.11
HOXA9-202ENST00000396345 WDR61Q9GZS3 305 aaKnown RBP14.36□□□□□ -0.11
HOXA9-202ENST00000396345 FBXL17Q9UF56 701 aa14.36□□□□□ -0.11
HOXA9-202ENST00000396345 ZNF98A6NK75 572 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 PRR20EP86478 221 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 PRR20CP86479 221 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 PRR20DP86480 221 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 PRR20BP86481 221 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 PRR20AP86496 221 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 PATE2Q6UY27 113 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 S100A7AQ86SG5 101 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 OR8I2Q8N0Y5 310 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 ZNF709Q8N972 641 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 ARV1Q9H2C2 271 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 SLC25A22Q9H936 323 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 WFDC1Q9HC57 220 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 SLC39A9Q9NUM3 307 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 TNFSF18Q9UNG2 199 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 PXMP4Q9Y6I8 212 aa14.35□□□□□ -0.11
HOXA9-202ENST00000396345 PRKDCP78527 4128 aaKnown RBP14.35□□□□□ -0.11
HOXA9-202ENST00000396345 TRAV2A0A0B4J234 112 aa14.34□□□□□ -0.11
HOXA9-202ENST00000396345 OR11H12B2RN74 326 aa14.34□□□□□ -0.11
HOXA9-202ENST00000396345 H3BRN7 92 aa14.34□□□□□ -0.11
HOXA9-202ENST00000396345 COX7A2P2O60397 106 aa14.34□□□□□ -0.11
HOXA9-202ENST00000396345 B2MP61769 119 aa14.34□□□□□ -0.11
HOXA9-202ENST00000396345 SCGB1C1Q8TD33 95 aa14.34□□□□□ -0.11
HOXA9-202ENST00000396345 SHANK2-AS3Q9BTD1 123 aa14.34□□□□□ -0.11
HOXA9-202ENST00000396345 hCG_2014768A0A024R1R8 64 aa14.33□□□□□ -0.12
HOXA9-202ENST00000396345 ELOA3CA0A087WX78 387 aaPredicted RBP14.33□□□□□ -0.12
HOXA9-202ENST00000396345 IGHV4-30-4P0DP06 118 aa14.33□□□□□ -0.12
HOXA9-202ENST00000396345 C10orf113Q5VZT2 155 aa14.33□□□□□ -0.12
HOXA9-202ENST00000396345 OR1L4Q8NGR5 311 aa14.33□□□□□ -0.12
HOXA9-202ENST00000396345 UHRF2Q96PU4 802 aa14.33□□□□□ -0.12
HOXA9-202ENST00000396345 SCRT1Q9BWW7 348 aa14.33□□□□□ -0.12
HOXA9-202ENST00000396345 DNAJC4Q9NNZ3 241 aa14.33□□□□□ -0.12
HOXA9-202ENST00000396345 UBQLN2Q9UHD9 624 aa14.33□□□□□ -0.12
HOXA9-202ENST00000396345 RNF222A6NCQ9 220 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 C17orf112F2Z3M2 114 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 CMC4P56277 68 aaPredicted RBP14.32□□□□□ -0.12
HOXA9-202ENST00000396345 LEMD1Q68G75 181 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 LINC00305Q7Z4B0 112 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 DEFB125Q8N687 156 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 TMEM37Q8WXS4 190 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 GPR82Q96P67 336 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 PFDN5Q99471 154 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 PARD6GQ9BYG4 376 aaPredicted RBP14.32□□□□□ -0.12
HOXA9-202ENST00000396345 WFDC10AQ9H1F0 79 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 SLC25A32Q9H2D1 315 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 TUBA4BQ9H853 241 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 NRN1Q9NPD7 142 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 KCNIP2Q9NS61 270 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 C19orf73Q9NVV2 129 aa14.32□□□□□ -0.12
HOXA9-202ENST00000396345 K7EQG2 157 aa14.31□□□□□ -0.12
HOXA9-202ENST00000396345 GALR1P47211 349 aa14.31□□□□□ -0.12
HOXA9-202ENST00000396345 ODF3L2Q3SX64 289 aa14.31□□□□□ -0.12
HOXA9-202ENST00000396345 DCANP1Q8TF63 244 aa14.31□□□□□ -0.12
HOXA9-202ENST00000396345 RNF24Q9Y225 148 aa14.31□□□□□ -0.12
HOXA9-202ENST00000396345 A8MZ25 164 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms