RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 TMED4Q7Z7H5 227 aa13.74□□□□□ -0.21
COL11A2-204ENST00000395194 UBE2DNLQ8IWF7 75 aa13.74□□□□□ -0.21
COL11A2-204ENST00000395194 OR8I2Q8N0Y5 310 aa13.74□□□□□ -0.21
COL11A2-204ENST00000395194 RABL2AQ9UBK7 228 aaPredicted RBP13.74□□□□□ -0.21
COL11A2-204ENST00000395194 RABL2BQ9UNT1 228 aa13.74□□□□□ -0.21
COL11A2-204ENST00000395194 RFNGQ9Y644 331 aa13.74□□□□□ -0.21
COL11A2-204ENST00000395194 IGKV1OR2-108A0A075B7D4 117 aa13.73□□□□□ -0.21
COL11A2-204ENST00000395194 PRSS29PA6NIE9 313 aa13.73□□□□□ -0.21
COL11A2-204ENST00000395194 SNRPGP15A8MWD9 76 aa13.73□□□□□ -0.21
COL11A2-204ENST00000395194 RTL8CO15255 209 aa13.73□□□□□ -0.21
COL11A2-204ENST00000395194 FAM78BQ5VT40 261 aa13.73□□□□□ -0.21
COL11A2-204ENST00000395194 C7orf50Q9BRJ6 194 aaKnown RBP13.73□□□□□ -0.21
COL11A2-204ENST00000395194 DKK2Q9UBU2 259 aa13.73□□□□□ -0.21
COL11A2-204ENST00000395194 RSL24D1Q9UHA3 163 aaKnown RBP13.73□□□□□ -0.21
COL11A2-204ENST00000395194 TMEM189A5PLL7 270 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 SMIM9A6NGZ8 99 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 FABP1P07148 127 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 RAB11AP62491 216 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 SRPXP78539 464 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 PSG9Q00887 426 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 RAB2BQ8WUD1 216 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 C20orf173Q96LM9 149 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 NIPSNAP3BQ9BS92 247 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 SLC25A22Q9H936 323 aa13.72□□□□□ -0.21
COL11A2-204ENST00000395194 FABP12A6NFH5 140 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 TNFSF8P32971 234 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 ZNF79Q15937 498 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 C1orf194Q5T5A4 169 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 EBLN2Q6P2I7 272 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 C1orf158Q8N1D5 194 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 C16orf92Q96LL3 132 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 TRGV9Q99603 122 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 MAGT1Q9H0U3 335 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 GOLT1BQ9Y3E0 138 aa13.71□□□□□ -0.21
COL11A2-204ENST00000395194 A0A0J9YX75 114 aa13.7□□□□□ -0.22
COL11A2-204ENST00000395194 LOC102723971A0A1B0GUV8 181 aa13.7□□□□□ -0.22
COL11A2-204ENST00000395194 ISLRO14498 428 aa13.7□□□□□ -0.22
COL11A2-204ENST00000395194 PITX3O75364 302 aa13.7□□□□□ -0.22
COL11A2-204ENST00000395194 IFNA21P01568 189 aa13.7□□□□□ -0.22
COL11A2-204ENST00000395194 VAMP1P23763 118 aa13.7□□□□□ -0.22
COL11A2-204ENST00000395194 GATA2P23769 480 aaPredicted RBP13.7□□□□□ -0.22
COL11A2-204ENST00000395194 ATP5IP56385 69 aaPredicted RBP13.7□□□□□ -0.22
COL11A2-204ENST00000395194 SLC25A32Q9H2D1 315 aa13.7□□□□□ -0.22
COL11A2-204ENST00000395194 YTHDF2Q9Y5A9 579 aaKnown RBP13.7□□□□□ -0.22
COL11A2-204ENST00000395194 RYR1P21817 5038 aa13.7□□□□□ -0.22
COL11A2-204ENST00000395194 HBE1P02100 147 aa13.69□□□□□ -0.22
COL11A2-204ENST00000395194 PAX9P55771 341 aa13.69□□□□□ -0.22
COL11A2-204ENST00000395194 THAP8Q8NA92 274 aa13.69□□□□□ -0.22
COL11A2-204ENST00000395194 SOSTQ9BQB4 213 aa13.69□□□□□ -0.22
COL11A2-204ENST00000395194 SLIRPQ9GZT3 109 aaKnown RBP13.69□□□□□ -0.22
COL11A2-204ENST00000395194 RPRMQ9NS64 109 aa13.69□□□□□ -0.22
COL11A2-204ENST00000395194 WRBO00258 174 aa13.68□□□□□ -0.22
COL11A2-204ENST00000395194 GALR1P47211 349 aa13.68□□□□□ -0.22
COL11A2-204ENST00000395194 RRN3P1Q2M238 152 aa13.68□□□□□ -0.22
COL11A2-204ENST00000395194 TMEM128Q5BJH2 165 aa13.68□□□□□ -0.22
COL11A2-204ENST00000395194 IGFL4Q6B9Z1 124 aa13.68□□□□□ -0.22
COL11A2-204ENST00000395194 CLUHP3Q96NS8 147 aa13.68□□□□□ -0.22
COL11A2-204ENST00000395194 RSG1Q9BU20 258 aa13.68□□□□□ -0.22
COL11A2-204ENST00000395194 TEX48A0A1B0GUV7 120 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 DUXBA0A1W2PPF3 345 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 ZNF98A6NK75 572 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 H3BMQ9 156 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 H3BP45 60 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 PRM2P04554 102 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 ORM2P19652 201 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 FAUP35544 74 aaKnown RBP13.67□□□□□ -0.22
COL11A2-204ENST00000395194 TMBIM6P55061 237 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 LGALS9BQ3B8N2 356 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 SPATA31B1PQ5VZV4 182 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 TMEM182Q6ZP80 229 aaPredicted RBP13.67□□□□□ -0.22
COL11A2-204ENST00000395194 MCFD2Q8NI22 146 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 TRIM63Q969Q1 353 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 C17orf77Q96MU5 243 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 TMEM208Q9BTX3 173 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 DOK5Q9P104 306 aa13.67□□□□□ -0.22
COL11A2-204ENST00000395194 NOL3O60936 208 aaKnown RBP13.66□□□□□ -0.22
COL11A2-204ENST00000395194 HOXB5P09067 269 aa13.66□□□□□ -0.22
COL11A2-204ENST00000395194 DAD1P61803 113 aa13.66□□□□□ -0.22
COL11A2-204ENST00000395194 AKR1C1Q04828 323 aa13.66□□□□□ -0.22
COL11A2-204ENST00000395194 PYDC2Q56P42 97 aa13.66□□□□□ -0.22
COL11A2-204ENST00000395194 TMEM88Q6PEY1 159 aa13.66□□□□□ -0.22
COL11A2-204ENST00000395194 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
COL11A2-204ENST00000395194 PRSS46E5RG02 174 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 M0R2Z0 102 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 SYNGR2O43760 224 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 MED6O75586 246 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 MEOX2P50222 304 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 FGL1Q08830 312 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 PPP1R1AQ13522 171 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 GGNBP1Q5YKI7 109 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 AMTNQ6UX39 209 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 TOMM5Q8N4H5 51 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 BPIFCQ8NFQ6 507 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 OR1B1Q8NGR6 318 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 BCL7BQ9BQE9 202 aa13.65□□□□□ -0.22
COL11A2-204ENST00000395194 PRB4P10163 310 aaPredicted RBP13.64□□□□□ -0.23
COL11A2-204ENST00000395194 SPINK13Q1W4C9 94 aa13.64□□□□□ -0.23
COL11A2-204ENST00000395194 ACOT7LQ6ZUV0 252 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms