RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SLC25A31Q9H0C2 315 aa14.84□□□□□ -0.03
SNCA-203ENST00000394986 SRD5A3Q9H8P0 318 aa14.84□□□□□ -0.03
SNCA-203ENST00000394986 DNASE2O00115 360 aaPredicted RBP14.83□□□□□ -0.03
SNCA-203ENST00000394986 CFDP00746 253 aaPredicted RBP14.83□□□□□ -0.03
SNCA-203ENST00000394986 CD5P06127 495 aa14.83□□□□□ -0.03
SNCA-203ENST00000394986 SBSPONQ8IVN8 264 aa14.83□□□□□ -0.03
SNCA-203ENST00000394986 FAM24BQ8N5W8 94 aa14.83□□□□□ -0.03
SNCA-203ENST00000394986 OR5C1Q8NGR4 320 aa14.83□□□□□ -0.03
SNCA-203ENST00000394986 WDR83OSQ9Y284 106 aa14.83□□□□□ -0.03
SNCA-203ENST00000394986 A8MZ25 164 aa14.83□□□□□ -0.04
SNCA-203ENST00000394986 SELENOTP62341 195 aa14.83□□□□□ -0.04
SNCA-203ENST00000394986 PAFAH1B2P68402 229 aa14.83□□□□□ -0.04
SNCA-203ENST00000394986 BAXQ07812 192 aa14.83□□□□□ -0.04
SNCA-203ENST00000394986 CLINT1Q14677 625 aa14.83□□□□□ -0.04
SNCA-203ENST00000394986 CITED4Q96RK1 184 aa14.83□□□□□ -0.04
SNCA-203ENST00000394986 SLC45A2Q9UMX9 530 aa14.83□□□□□ -0.04
SNCA-203ENST00000394986 HELTA6NFD8 242 aa14.82□□□□□ -0.04
SNCA-203ENST00000394986 CAMLGP49069 296 aa14.82□□□□□ -0.04
SNCA-203ENST00000394986 ZNF124Q15973 351 aa14.82□□□□□ -0.04
SNCA-203ENST00000394986 Q5BKY6 102 aa14.82□□□□□ -0.04
SNCA-203ENST00000394986 LEMD1Q68G75 181 aa14.82□□□□□ -0.04
SNCA-203ENST00000394986 SIGLEC15Q6ZMC9 328 aa14.82□□□□□ -0.04
SNCA-203ENST00000394986 ZNF546Q86UE3 836 aa14.82□□□□□ -0.04
SNCA-203ENST00000394986 RBMY1BA6NDE4 496 aaKnown RBP14.81□□□□□ -0.04
SNCA-203ENST00000394986 RBMY1EA6NEQ0 496 aaKnown RBP14.81□□□□□ -0.04
SNCA-203ENST00000394986 GIPP09681 153 aaPredicted RBP14.81□□□□□ -0.04
SNCA-203ENST00000394986 RBMY1DP0C7P1 496 aaKnown RBP14.81□□□□□ -0.04
SNCA-203ENST00000394986 LYL1P12980 280 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 FGF7P21781 194 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 NUP62P37198 522 aaPredicted RBP14.81□□□□□ -0.04
SNCA-203ENST00000394986 ATP6V1FQ16864 119 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 MIC13Q5XKP0 118 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 APRG1Q8IVJ8 170 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 THAP6Q8TBB0 222 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 GGTLC1Q9BX51 225 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 ARL6Q9H0F7 186 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 SLC25A22Q9H936 323 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 MAP6D1Q9H9H5 199 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 PFDN2Q9UHV9 154 aa14.81□□□□□ -0.04
SNCA-203ENST00000394986 OR5G3P0C626 314 aa14.8□□□□□ -0.04
SNCA-203ENST00000394986 RPL12P30050 165 aaKnown RBP14.8□□□□□ -0.04
SNCA-203ENST00000394986 PATE2Q6UY27 113 aa14.8□□□□□ -0.04
SNCA-203ENST00000394986 DCANP1Q8TF63 244 aa14.8□□□□□ -0.04
SNCA-203ENST00000394986 UHRF2Q96PU4 802 aa14.8□□□□□ -0.04
SNCA-203ENST00000394986 SCRT1Q9BWW7 348 aa14.8□□□□□ -0.04
SNCA-203ENST00000394986 SMIM3Q9BZL3 60 aa14.8□□□□□ -0.04
SNCA-203ENST00000394986 HIGD1AQ9Y241 93 aa14.8□□□□□ -0.04
SNCA-203ENST00000394986 HSPB11Q9Y547 144 aa14.8□□□□□ -0.04
SNCA-203ENST00000394986 ZNF98A6NK75 572 aa14.79□□□□□ -0.04
SNCA-203ENST00000394986 K7EQG2 157 aa14.79□□□□□ -0.04
SNCA-203ENST00000394986 HYPMO75409 117 aa14.79□□□□□ -0.04
SNCA-203ENST00000394986 PLP1P60201 277 aa14.79□□□□□ -0.04
SNCA-203ENST00000394986 SLC25A32Q9H2D1 315 aa14.79□□□□□ -0.04
SNCA-203ENST00000394986 TRAV2A0A0B4J234 112 aa14.78□□□□□ -0.04
SNCA-203ENST00000394986 H3BRN7 92 aa14.78□□□□□ -0.04
SNCA-203ENST00000394986 RAP2BP61225 183 aa14.78□□□□□ -0.04
SNCA-203ENST00000394986 RAB31Q13636 194 aa14.78□□□□□ -0.04
SNCA-203ENST00000394986 OR8I2Q8N0Y5 310 aa14.78□□□□□ -0.04
SNCA-203ENST00000394986 SLC25A39Q9BZJ4 359 aaPredicted RBP14.78□□□□□ -0.04
SNCA-203ENST00000394986 ZNF688P0C7X2 276 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 AP2S1P53680 142 aaPredicted RBP14.77□□□□□ -0.04
SNCA-203ENST00000394986 DEFB131AP59861 70 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 OPCMLQ14982 345 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 HAGHQ16775 308 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 C1orf194Q5T5A4 169 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 LINC00322Q6ZN03 302 aaPredicted RBP14.77□□□□□ -0.04
SNCA-203ENST00000394986 CHAC2Q8WUX2 184 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 SHANK2-AS3Q9BTD1 123 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 ARV1Q9H2C2 271 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 NRN1Q9NPD7 142 aa14.77□□□□□ -0.04
SNCA-203ENST00000394986 PRR20EP86478 221 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 PRR20CP86479 221 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 PRR20DP86480 221 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 PRR20BP86481 221 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 PRR20AP86496 221 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 ATP5SQ99766 215 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 FAM110AQ9BQ89 295 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 NPCDR1Q9BY65 106 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 FBXL17Q9UF56 701 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 COL7A1Q02388 2944 aa14.76□□□□□ -0.05
SNCA-203ENST00000394986 COX7A2P2O60397 106 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 TMEM37Q8WXS4 190 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 WFDC1Q9HC57 220 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 PXMP4Q9Y6I8 212 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 RPL29P47914 159 aaKnown RBP14.75□□□□□ -0.05
SNCA-203ENST00000394986 B2MP61769 119 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 FGL1Q08830 312 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 MORN5Q5VZ52 161 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 OR2T35Q8NGX2 323 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 ASB13Q8WXK3 278 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 WDR61Q9GZS3 305 aaKnown RBP14.75□□□□□ -0.05
SNCA-203ENST00000394986 SLC39A9Q9NUM3 307 aa14.75□□□□□ -0.05
SNCA-203ENST00000394986 HUWE1Q7Z6Z7 4374 aaKnown RBP14.74□□□□□ -0.05
SNCA-203ENST00000394986 G3V3Q6 166 aa14.74□□□□□ -0.05
SNCA-203ENST00000394986 RPL35AP18077 110 aaKnown RBP14.74□□□□□ -0.05
SNCA-203ENST00000394986 PXDC1Q5TGL8 231 aa14.74□□□□□ -0.05
SNCA-203ENST00000394986 LINC00305Q7Z4B0 112 aa14.74□□□□□ -0.05
SNCA-203ENST00000394986 C17orf77Q96MU5 243 aa14.74□□□□□ -0.05
SNCA-203ENST00000394986 FXYD6-FXYD2A0A087WZ82 144 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 LOC102724200A0A096LPH7 203 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms