RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 Q8N9W7 124 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 AKAP6Q13023 2319 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 IGHV7-81A0A0B4J1V7 117 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 A0A1B0GUS0 222 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 SNURFLB1AK76 121 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 GNG7O60262 68 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 EGR2P11161 476 aaPredicted RBP20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 SLC35B1P78383 322 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 RNF125Q96EQ8 232 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 TMEM68Q96MH6 324 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 C7orf69Q9H7B7 122 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 LPAR2Q9HBW0 351 aa20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 H3BRN7 92 aa20.13■□□□□ 0.81
SMARCD3-203ENST00000392811 IL4P05112 153 aa20.13■□□□□ 0.81
SMARCD3-203ENST00000392811 MFAP4P55083 255 aa20.13■□□□□ 0.81
SMARCD3-203ENST00000392811 GNB1LQ9BYB4 327 aa20.13■□□□□ 0.81
SMARCD3-203ENST00000392811 TRAV30A0A087WSZ9 112 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 TRBV9A0A0B4J1U6 114 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 TCRAP04437 139 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 PRR27Q6MZM9 219 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 NUDT10Q8NFP7 164 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 MBD6Q96DN6 1003 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 NUDT11Q96G61 164 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 OTORQ9NRC9 128 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 WI2-2373I1.2A0A1W2PRP0 233 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 LINC00587B1AMM8 73 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 F8W735 103 aaPredicted RBP20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 GATCO43716 136 aaKnown RBP20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 RPL19P84098 196 aaKnown RBP20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 GBGT1Q8N5D6 347 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 ZNF48Q96MX3 618 aaPredicted RBP20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 C1RLQ9NZP8 487 aa20.12■□□□□ 0.81
SMARCD3-203ENST00000392811 ASH1LQ9NR48 2969 aaKnown RBP20.11■□□□□ 0.81
SMARCD3-203ENST00000392811 GRIFINA4D1Z8 144 aa20.11■□□□□ 0.81
SMARCD3-203ENST00000392811 TMEM256Q8N2U0 113 aa20.11■□□□□ 0.81
SMARCD3-203ENST00000392811 GPR82Q96P67 336 aa20.11■□□□□ 0.81
SMARCD3-203ENST00000392811 NDUFB8O95169 186 aa20.1■□□□□ 0.81
SMARCD3-203ENST00000392811 BRS3P32247 399 aa20.1■□□□□ 0.81
SMARCD3-203ENST00000392811 SMIM12Q96EX1 92 aa20.1■□□□□ 0.81
SMARCD3-203ENST00000392811 FMC1Q96HJ9 113 aa20.1■□□□□ 0.81
SMARCD3-203ENST00000392811 Q56UQ5 140 aa20.1■□□□□ 0.81
SMARCD3-203ENST00000392811 TMEM18Q96B42 140 aa20.1■□□□□ 0.81
SMARCD3-203ENST00000392811 C21orf62Q9NYP8 219 aa20.1■□□□□ 0.81
SMARCD3-203ENST00000392811 HLA-DRB1P01911 266 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 DNLZQ5SXM8 178 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 BPIFA4PQ86YQ2 179 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 EXOC3-AS1Q8N2X6 119 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 PIP4P2Q8N4L2 257 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 GRAMD2BQ96HH9 432 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 HSPB9Q9BQS6 159 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 MLST8Q9BVC4 326 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 THYN1Q9P016 225 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 IZUMO1RA6ND01 250 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 NPFFO15130 113 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 OR2J3O76001 311 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 USF2Q15853 346 aaPredicted RBP20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 MRPL54Q6P161 138 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 WDR73Q6P4I2 378 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 TMEM136Q6ZRR5 245 aa20.09■□□□□ 0.81
SMARCD3-203ENST00000392811 CFAP46Q8IYW2 2715 aa20.08■□□□□ 0.8
SMARCD3-203ENST00000392811 NUPR1O60356 82 aa20.08■□□□□ 0.8
SMARCD3-203ENST00000392811 LTAP01374 205 aa20.08■□□□□ 0.8
SMARCD3-203ENST00000392811 IGHV3-23P01764 117 aa20.08■□□□□ 0.8
SMARCD3-203ENST00000392811 JOSD1Q15040 202 aaPredicted RBP20.08■□□□□ 0.8
SMARCD3-203ENST00000392811 BCL6BQ8N143 479 aaPredicted RBP20.08■□□□□ 0.8
SMARCD3-203ENST00000392811 NAT8BQ9UHF3 227 aa20.08■□□□□ 0.8
SMARCD3-203ENST00000392811 TRBV19A0A075B6N1 114 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 MT-ND6P03923 174 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 IGLC2P0DOY2 106 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 FCGR2BP31994 310 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 OR4F17Q8NGA8 305 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 C17orf77Q96MU5 243 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 AMY1AP04745 511 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 CRISP2P16562 243 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 COX19Q49B96 90 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 TP53TG3Q9ULZ0 132 aa20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 POLR3KQ9Y2Y1 108 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-203ENST00000392811 CENPVL3A0A0U1RRI6 287 aa20.06■□□□□ 0.8
SMARCD3-203ENST00000392811 CCL19Q99731 98 aa20.06■□□□□ 0.8
SMARCD3-203ENST00000392811 CHRDL1Q9BU40 450 aa20.06■□□□□ 0.8
SMARCD3-203ENST00000392811 PRDM13Q9H4Q3 707 aa20.06■□□□□ 0.8
SMARCD3-203ENST00000392811 MRPS12O15235 138 aaKnown RBP20.05■□□□□ 0.8
SMARCD3-203ENST00000392811 CMTM2Q8TAZ6 248 aa20.05■□□□□ 0.8
SMARCD3-203ENST00000392811 RNF24Q9Y225 148 aa20.05■□□□□ 0.8
SMARCD3-203ENST00000392811 GZMBP10144 247 aa20.05■□□□□ 0.8
SMARCD3-203ENST00000392811 RAB4BP61018 213 aa20.05■□□□□ 0.8
SMARCD3-203ENST00000392811 FBXL7Q9UJT9 491 aa20.05■□□□□ 0.8
SMARCD3-203ENST00000392811 LINC00322Q6ZN03 302 aaPredicted RBP20.04■□□□□ 0.8
SMARCD3-203ENST00000392811 PIMREGQ9BSJ6 248 aa20.04■□□□□ 0.8
SMARCD3-203ENST00000392811 TRAV8-1A0A0A6YYK1 113 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 OR2T8A6NH00 312 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 GOLT1AQ6ZVE7 132 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 Q86TA4 180 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 NUP35Q8NFH5 326 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 OR5R1Q8NH85 324 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 TSKUQ8WUA8 353 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 CSMD1Q96PZ7 3565 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 IGHV4-61A0A0C4DH41 118 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 PAX8Q06710 450 aa20.03■□□□□ 0.8
SMARCD3-203ENST00000392811 SIGLEC15Q6ZMC9 328 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms