RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 A0A0J9YX75 114 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 F6UB75 175 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 DUSP14O95147 198 aaKnown RBP9.97□□□□□ -0.81
PTCH1-202ENST00000375271 ATP5G1P05496 136 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 ATP5G3P48201 142 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 MEF2DQ14814 521 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 AARDQ4LEZ3 155 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 NMSQ5H8A3 153 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 SPATA12Q7Z6I5 190 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 Q8N1X5 172 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 OR52I2Q8NH67 350 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 DTD1Q8TEA8 209 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 GPR146Q96CH1 333 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 SLC25A22Q9H936 323 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 EXTL2Q9UBQ6 330 aa9.97□□□□□ -0.81
PTCH1-202ENST00000375271 PAIP2BQ9ULR5 123 aaKnown RBP9.97□□□□□ -0.81
PTCH1-202ENST00000375271 DISC1C4P0D8 188 aa9.96□□□□□ -0.82
PTCH1-202ENST00000375271 ATP6V1G2O95670 118 aa9.96□□□□□ -0.82
PTCH1-202ENST00000375271 OR2F1Q13607 317 aa9.96□□□□□ -0.82
PTCH1-202ENST00000375271 GPR107Q5VW38 600 aa9.96□□□□□ -0.82
PTCH1-202ENST00000375271 STEAP1BQ6NZ63 245 aa9.96□□□□□ -0.82
PTCH1-202ENST00000375271 SELENOHQ8IZQ5 122 aaKnown RBP9.96□□□□□ -0.82
PTCH1-202ENST00000375271 TMEM229BQ8NBD8 167 aa9.96□□□□□ -0.82
PTCH1-202ENST00000375271 MTFP1Q9UDX5 166 aa9.96□□□□□ -0.82
PTCH1-202ENST00000375271 KCNIP3Q9Y2W7 256 aa9.96□□□□□ -0.82
PTCH1-202ENST00000375271 A0A087WXM4 84 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 ZNF705GA8MUZ8 300 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-202ENST00000375271 ATP5IP56385 69 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-202ENST00000375271 RAB11AP62491 216 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 ZNF90Q03938 601 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 SURF2Q15527 256 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-202ENST00000375271 GPR141Q7Z602 305 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 LHFPL5Q8TAF8 219 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 GLYATL2Q8WU03 294 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 YIPF6Q96EC8 236 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 HSPG2P98160 4391 aa9.95□□□□□ -0.82
PTCH1-202ENST00000375271 SOCS3O14543 225 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 CFDP00746 253 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-202ENST00000375271 GPX4P36969 197 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-202ENST00000375271 VBP1P61758 197 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 NCS1P62166 190 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 FGL1Q08830 312 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 SPINK13Q1W4C9 94 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 OR4D10Q8NGI6 311 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 TMEM170AQ8WVE7 144 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 PTTG2Q9NZH5 202 aa9.94□□□□□ -0.82
PTCH1-202ENST00000375271 PIGBOS1A0A0B4J2F0 54 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 CRYM-AS1A6NIL9 109 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 M0R2Z0 102 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 HTN1P15515 57 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 AKR1C4P17516 323 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 CCR6P51684 374 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 RHOBP62745 196 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 GAMTQ14353 236 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 SMCO1Q147U7 214 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 GGNBP1Q5YKI7 109 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 SSX7Q7RTT5 188 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 IL22RA2Q969J5 263 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 RSG1Q9BU20 258 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 RBKSQ9H477 322 aa9.93□□□□□ -0.82
PTCH1-202ENST00000375271 ADAP1O75689 374 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 ANXA3P12429 323 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 TSPOP30536 169 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
PTCH1-202ENST00000375271 MRPS10P82664 201 aaKnown RBP9.92□□□□□ -0.82
PTCH1-202ENST00000375271 FAAP20Q6NZ36 180 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 ZNF738Q8NE65 137 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 OR1B1Q8NGR6 318 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 GPR82Q96P67 336 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 SCGB3A2Q96PL1 93 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 LINC01587Q99440 93 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 PRRT1Q99946 306 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 TMEM147Q9BVK8 224 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
PTCH1-202ENST00000375271 CBY3A6NI87 242 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 RGS5O15539 181 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 RPP30P78346 268 aaKnown RBP9.91□□□□□ -0.82
PTCH1-202ENST00000375271 SRPXP78539 464 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 SSBP1Q04837 148 aaKnown RBP9.91□□□□□ -0.82
PTCH1-202ENST00000375271 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 BPIFCQ8NFQ6 507 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 OR11H7Q8NGC8 314 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 OR10J6PQ8NGY7 276 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 LRRC20Q8TCA0 184 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 TRGV9Q99603 122 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 RTBDNQ9BSG5 229 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-202ENST00000375271 FUNDC2Q9BWH2 189 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 SLC25A32Q9H2D1 315 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 Q9H8V8 135 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 TMEM56-RWDD3S4R434 201 aa9.91□□□□□ -0.82
PTCH1-202ENST00000375271 A0A0B4J2A0 478 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 BOLA2-SMG1P6H3BVE0 249 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 AKAIN1P0CW23 69 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 ORM2P19652 201 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms