RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ZSWIM8A7E2V4 1837 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 VWA8A3KMH1 1905 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 A8MWV9 139 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 NTN3O00634 580 aaPredicted RBP14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 TIMM23O14925 209 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 LYZL1Q6UWQ5 148 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 CDKN1AP38936 164 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 COX11Q9Y6N1 276 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 NCOR1O75376 2440 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 PAX9P55771 341 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 MYLKQ15746 1914 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 FER1L5A0AVI2 2057 aa14.06□□□□□ -0.16
PTP4A1-201ENST00000370651 PLXNA3P51805 1871 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 DOPEY2Q9Y3R5 2298 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 IFI27P40305 119 aaPredicted RBP14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 ANAPC13Q9BS18 74 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 ATP5J2P56134 94 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 PI4KAP42356 2102 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 CD5LO43866 347 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 HS3ST6Q96QI5 342 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 PRDM6Q9NQX0 595 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 ZNF138P52744 262 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 RHOGP84095 191 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 KIR3DL3Q8N743 410 aa14.05□□□□□ -0.16
PTP4A1-201ENST00000370651 MLNRO43193 412 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 SCN5AQ14524 2016 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 IGKV2-40A0A087WW87 121 aaPredicted RBP14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 IGKV2D-40P01614 121 aaPredicted RBP14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 CD7P09564 240 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 RLFQ13129 1914 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 GAGE12BA1L429 117 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 LAGE3Q14657 143 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 A0A1B0GWJ7 208 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 IGHV3-11P01762 117 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 GLMPQ8WWB7 406 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 LIME1Q9H400 295 aa14.04□□□□□ -0.16
PTP4A1-201ENST00000370651 FNDC10F2Z333 226 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 IGHV4-39P01824 125 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 B3GALT5-AS1P59052 145 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 TMEM95Q3KNT9 176 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 CD300EQ496F6 205 aaPredicted RBP14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 TMEM101Q96IK0 257 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 CSRP2Q16527 193 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 MBNL3Q9NUK0 354 aaKnown RBP14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 TRAV2A0A0B4J234 112 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 FXYD7P58549 80 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 KIR3DS1Q14943 382 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 CENPVQ7Z7K6 275 aaPredicted RBP14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 TRAV8-1A0A0A6YYK1 113 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 DUX3Q96PT4 197 aa14.03□□□□□ -0.16
PTP4A1-201ENST00000370651 HEATR5AQ86XA9 2040 aa14.02□□□□□ -0.16
PTP4A1-201ENST00000370651 ZNF726P1Q15940 193 aa14.02□□□□□ -0.16
PTP4A1-201ENST00000370651 LINC00479Q96M42 142 aa14.02□□□□□ -0.16
PTP4A1-201ENST00000370651 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.16
PTP4A1-201ENST00000370651 MCRIP2Q9BUT9 160 aaKnown RBP14.02□□□□□ -0.17
PTP4A1-201ENST00000370651 RNASE2P10153 161 aaKnown RBP14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 TMEM200BQ69YZ2 307 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 C18orf32Q8TCD1 76 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 LYNX1G3V0Z9 82 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 H0YJW9 148 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 NDUFS8O00217 210 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 TOMM40O96008 361 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 LYNX1P0DP58 116 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 PLNP26678 52 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 ZNF329Q86UD4 541 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 RNASE6Q93091 150 aaKnown RBP14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 VOPP1Q96AW1 172 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 PLSCR4Q9NRQ2 329 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 PAX2Q02962 417 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 MLANAQ16655 118 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 KLF17Q5JT82 389 aaPredicted RBP14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 RNF182Q8N6D2 247 aa14.01□□□□□ -0.17
PTP4A1-201ENST00000370651 HEATR1Q9H583 2144 aaKnown RBP14□□□□□ -0.17
PTP4A1-201ENST00000370651 LINC01549A6NIU2 74 aa14□□□□□ -0.17
PTP4A1-201ENST00000370651 ESDP10768 282 aa14□□□□□ -0.17
PTP4A1-201ENST00000370651 Q0VFX4 171 aa14□□□□□ -0.17
PTP4A1-201ENST00000370651 IGHV2-26A0A0B4J1V2 119 aa14□□□□□ -0.17
PTP4A1-201ENST00000370651 CNTFRP26992 372 aa14□□□□□ -0.17
PTP4A1-201ENST00000370651 TOMM7Q9P0U1 55 aa14□□□□□ -0.17
PTP4A1-201ENST00000370651 CACNA1GO43497 2377 aa14□□□□□ -0.17
PTP4A1-201ENST00000370651 ABHD17AQ96GS6 310 aa14□□□□□ -0.17
PTP4A1-201ENST00000370651 IGKV1D-17A0A075B6S4 117 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 TRBV7-9A0A0J9YWB2 115 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 IGHV1-8P0DP01 117 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 IGLC2P0DOY2 106 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 IGLC3P0DOY3 106 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 YPEL3P61236 119 aaPredicted RBP13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 Q6ZWC4 215 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 DIDO1Q9BTC0 2240 aaKnown RBP13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 WDR90Q96KV7 1748 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 ETV2O00321 342 aaPredicted RBP13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 SH2D1AO60880 128 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 RPL15P61313 204 aaKnown RBP13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 IL15RAQ13261 267 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 PSG3Q16557 428 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 ZC2HC1BQ5TFG8 222 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 COLCA1Q6ZS62 124 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 PKDREJQ9NTG1 2253 aa13.99□□□□□ -0.17
PTP4A1-201ENST00000370651 WISP1O95388 367 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms