RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PRR20DP86480 221 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 PRR20BP86481 221 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 PRR20AP86496 221 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 IL34Q6ZMJ4 242 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 ZNF471Q9BX82 626 aaPredicted RBP11.57□□□□□ -0.56
TPM1-206ENST00000358278 SLC39A9Q9NUM3 307 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 PFDN2Q9UHV9 154 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 NBEAL1Q6ZS30 2694 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 A0A1W2PS18 150 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 COX7A2P2O60397 106 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 S100A7P31151 101 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 INSL3P51460 131 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 NKX2-5P52952 324 aaPredicted RBP11.57□□□□□ -0.56
TPM1-206ENST00000358278 PLP1P60201 277 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 PXDC1Q5TGL8 231 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 GPR61Q9BZJ8 451 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 TMEM231Q9H6L2 316 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 SIGLEC8Q9NYZ4 499 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 SMPXQ9UHP9 88 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 HIGD1AQ9Y241 93 aa11.57□□□□□ -0.56
TPM1-206ENST00000358278 IGHV3-66A0A0C4DH42 116 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 APOHP02749 345 aaPredicted RBP11.56□□□□□ -0.56
TPM1-206ENST00000358278 C8orf88P0DMB2 117 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 ADAMTSL5Q6ZMM2 481 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 S100A7AQ86SG5 101 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 C9orf62Q8N4C0 152 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 OR1L4Q8NGR5 311 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 ST8SIA2Q92186 375 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 PFDN5Q99471 154 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 RHPN1-AS1Q9BWJ2 59 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 CYTL1Q9NRR1 136 aa11.56□□□□□ -0.56
TPM1-206ENST00000358278 CHEK1O14757 476 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 ATP6V0CP27449 155 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 FFAR4Q5NUL3 377 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 GNPNAT1Q96EK6 184 aaPredicted RBP11.55□□□□□ -0.56
TPM1-206ENST00000358278 GRAMD2BQ96HH9 432 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 MLXQ9UH92 298 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 TIMM9Q9Y5J7 89 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 SELENOKQ9Y6D0 94 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 ELOA3CA0A087WX78 387 aaPredicted RBP11.55□□□□□ -0.56
TPM1-206ENST00000358278 BOLA2-SMG1P6H3BVE0 249 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 C4BPBP20851 252 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 C10orf113Q5VZT2 155 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 UHRF2Q96PU4 802 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 PSMG3Q9BT73 122 aaPredicted RBP11.55□□□□□ -0.56
TPM1-206ENST00000358278 SH3BGRL3Q9H299 93 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 TECRQ9NZ01 308 aaKnown RBP11.55□□□□□ -0.56
TPM1-206ENST00000358278 RFNGQ9Y644 331 aa11.55□□□□□ -0.56
TPM1-206ENST00000358278 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
TPM1-206ENST00000358278 OXLD1Q5BKU9 147 aa11.54□□□□□ -0.56
TPM1-206ENST00000358278 TMEM37Q8WXS4 190 aa11.54□□□□□ -0.56
TPM1-206ENST00000358278 SLC25A39Q9BZJ4 359 aaPredicted RBP11.54□□□□□ -0.56
TPM1-206ENST00000358278 VSIRQ9H7M9 311 aa11.54□□□□□ -0.56
TPM1-206ENST00000358278 SLC25A22Q9H936 323 aa11.54□□□□□ -0.56
TPM1-206ENST00000358278 DNAJC4Q9NNZ3 241 aa11.54□□□□□ -0.56
TPM1-206ENST00000358278 IGLV1-51P01701 117 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 LAMTOR1Q6IAA8 161 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 PATE2Q6UY27 113 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 LINC00305Q7Z4B0 112 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 GATAD1Q8WUU5 269 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 RNF2Q99496 336 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 SLC25A32Q9H2D1 315 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 U3KQE9 123 aa11.53□□□□□ -0.56
TPM1-206ENST00000358278 H3BRN7 92 aa11.52□□□□□ -0.56
TPM1-206ENST00000358278 BUB3O43684 328 aa11.52□□□□□ -0.56
TPM1-206ENST00000358278 TPT1P13693 172 aaKnown RBP11.52□□□□□ -0.56
TPM1-206ENST00000358278 DEFB114Q30KQ6 69 aa11.52□□□□□ -0.56
TPM1-206ENST00000358278 CD300EQ496F6 205 aaPredicted RBP11.52□□□□□ -0.56
TPM1-206ENST00000358278 SHANK2-AS3Q9BTD1 123 aa11.52□□□□□ -0.56
TPM1-206ENST00000358278 SCRT1Q9BWW7 348 aa11.52□□□□□ -0.56
TPM1-206ENST00000358278 ZNF98A6NK75 572 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
TPM1-206ENST00000358278 SERF2P84101 59 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 ACOT6Q3I5F7 207 aaPredicted RBP11.52□□□□□ -0.57
TPM1-206ENST00000358278 LEMD1Q68G75 181 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 LCN12Q6JVE5 192 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 C16orf54Q6UWD8 224 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 RBPMS2Q6ZRY4 209 aaKnown RBP11.52□□□□□ -0.57
TPM1-206ENST00000358278 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 OR8I2Q8N0Y5 310 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 OR2G3Q8NGZ4 309 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 RNF24Q9Y225 148 aa11.52□□□□□ -0.57
TPM1-206ENST00000358278 G3V4G9 280 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 WIPF1O43516 503 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 CD5P06127 495 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 M6PRP20645 277 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 C1orf194Q5T5A4 169 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 FAM78BQ5VT40 261 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 SLC51BQ86UW2 128 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 BAP18Q8IXM2 172 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 TMEM61Q8N0U2 210 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 OR2K2Q8NGT1 345 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 STOML3Q8TAV4 291 aa11.51□□□□□ -0.57
TPM1-206ENST00000358278 IGKV3-7A0A075B6H7 116 aa11.5□□□□□ -0.57
TPM1-206ENST00000358278 SIGLEC15Q6ZMC9 328 aa11.5□□□□□ -0.57
TPM1-206ENST00000358278 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
TPM1-206ENST00000358278 IZUMO1RA6ND01 250 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms