RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 C1QBP02746 253 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 PRR20EP86478 221 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 PRR20CP86479 221 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 PRR20DP86480 221 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 PRR20BP86481 221 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 PRR20AP86496 221 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 OPCMLQ14982 345 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 CD300EQ496F6 205 aaPredicted RBP11.75□□□□□ -0.53
TRIM13-201ENST00000356017 RBPMS2Q6ZRY4 209 aaKnown RBP11.75□□□□□ -0.53
TRIM13-201ENST00000356017 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 WFDC1Q9HC57 220 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 U3KQE9 123 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 IGHV3OR16-13A0A075B7E8 117 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 ELOA3CA0A087WX78 387 aaPredicted RBP11.75□□□□□ -0.53
TRIM13-201ENST00000356017 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 BORCS7-ASMTA0A0B4J1R7 106 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 IGHV3-74A0A0B4J1X5 117 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 A0A0D9SG52 128 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 B2MP61769 119 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
TRIM13-201ENST00000356017 MIC13Q5XKP0 118 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 ST8SIA2Q92186 375 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 HYLS1Q96M11 299 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 SLC39A9Q9NUM3 307 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 RNF24Q9Y225 148 aa11.75□□□□□ -0.53
TRIM13-201ENST00000356017 BUB3O43684 328 aa11.74□□□□□ -0.53
TRIM13-201ENST00000356017 APOHP02749 345 aaPredicted RBP11.74□□□□□ -0.53
TRIM13-201ENST00000356017 OR5G3P0C626 314 aa11.74□□□□□ -0.53
TRIM13-201ENST00000356017 ZFP69Q49AA0 526 aa11.74□□□□□ -0.53
TRIM13-201ENST00000356017 C1orf194Q5T5A4 169 aa11.74□□□□□ -0.53
TRIM13-201ENST00000356017 RNF2Q99496 336 aa11.74□□□□□ -0.53
TRIM13-201ENST00000356017 HIGD1AQ9Y241 93 aa11.74□□□□□ -0.53
TRIM13-201ENST00000356017 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
TRIM13-201ENST00000356017 NOTCH3Q9UM47 2321 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 IGHV3-66A0A0C4DH42 116 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 JTBO76095 146 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 BEAN1Q3B7T3 259 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 KCNRGQ8N5I3 272 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 OR1L4Q8NGR5 311 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 PFDN5Q99471 154 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 ARV1Q9H2C2 271 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 DOK5Q9P104 306 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 ZNF256Q9Y2P7 627 aaPredicted RBP11.73□□□□□ -0.53
TRIM13-201ENST00000356017 CMYA5Q8N3K9 4069 aa11.73□□□□□ -0.53
TRIM13-201ENST00000356017 HELTA6NFD8 242 aa11.72□□□□□ -0.53
TRIM13-201ENST00000356017 TSPAN4O14817 238 aa11.72□□□□□ -0.53
TRIM13-201ENST00000356017 COX7A2P2O60397 106 aa11.72□□□□□ -0.53
TRIM13-201ENST00000356017 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
TRIM13-201ENST00000356017 MGAM2Q2M2H8 2515 aa11.72□□□□□ -0.53
TRIM13-201ENST00000356017 PAFAH1B2P68402 229 aa11.71□□□□□ -0.53
TRIM13-201ENST00000356017 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.53
TRIM13-201ENST00000356017 FAM90A2PQ658T7 463 aa11.71□□□□□ -0.53
TRIM13-201ENST00000356017 TCF24Q7RTU0 167 aa11.71□□□□□ -0.53
TRIM13-201ENST00000356017 GATAD1Q8WUU5 269 aa11.71□□□□□ -0.53
TRIM13-201ENST00000356017 SPAG8Q99932 426 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-201ENST00000356017 ARPC5LQ9BPX5 153 aa11.71□□□□□ -0.53
TRIM13-201ENST00000356017 RSG1Q9BU20 258 aa11.71□□□□□ -0.53
TRIM13-201ENST00000356017 SLC25A39Q9BZJ4 359 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-201ENST00000356017 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.53
TRIM13-201ENST00000356017 ZNF98A6NK75 572 aa11.71□□□□□ -0.54
TRIM13-201ENST00000356017 RPL11P62913 178 aaKnown RBP11.71□□□□□ -0.54
TRIM13-201ENST00000356017 LINC00305Q7Z4B0 112 aa11.71□□□□□ -0.54
TRIM13-201ENST00000356017 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.54
TRIM13-201ENST00000356017 GLMPQ8WWB7 406 aa11.71□□□□□ -0.54
TRIM13-201ENST00000356017 GPR82Q96P67 336 aa11.71□□□□□ -0.54
TRIM13-201ENST00000356017 SHANK2-AS3Q9BTD1 123 aa11.71□□□□□ -0.54
TRIM13-201ENST00000356017 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 IZUMO1RA6ND01 250 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 H3BRN7 92 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 GP9P14770 177 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 CXCL2P19875 107 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 KRTAP10-11P60412 298 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 GUCA2BQ16661 112 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 RPL7L1Q6DKI1 246 aaKnown RBP11.7□□□□□ -0.54
TRIM13-201ENST00000356017 PATE2Q6UY27 113 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 SIGLEC15Q6ZMC9 328 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 HSD17B11Q8NBQ5 300 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 TMEM37Q8WXS4 190 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 GNPNAT1Q96EK6 184 aaPredicted RBP11.7□□□□□ -0.54
TRIM13-201ENST00000356017 UHRF2Q96PU4 802 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 SELENOKQ9Y6D0 94 aa11.7□□□□□ -0.54
TRIM13-201ENST00000356017 ZNF785A8K8V0 405 aa11.69□□□□□ -0.54
TRIM13-201ENST00000356017 PSMG3Q9BT73 122 aaPredicted RBP11.69□□□□□ -0.54
TRIM13-201ENST00000356017 SLC25A22Q9H936 323 aa11.69□□□□□ -0.54
TRIM13-201ENST00000356017 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
TRIM13-201ENST00000356017 OR4C46A6NHA9 309 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 BCL2L11O43521 198 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 ATP6V0CP27449 155 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 SERF2P84101 59 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 IFITM2Q01629 132 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 FFAR4Q5NUL3 377 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 TMUB2Q71RG4 321 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 GTSCR1Q86UQ5 136 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 TRAV2A0A0B4J234 112 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 DNASE2O00115 360 aaPredicted RBP11.68□□□□□ -0.54
TRIM13-201ENST00000356017 RPL7P18124 248 aaKnown RBP11.68□□□□□ -0.54
TRIM13-201ENST00000356017 GALR1P47211 349 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms