RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 C11orf1Q9H5F2 150 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 LYRM2Q9NU23 88 aaPredicted RBP10.41□□□□□ -0.74
LIMS1-201ENST00000332345 SLC45A2Q9UMX9 530 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 E5RGE8 158 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 K7EQG2 157 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 CST7O76096 145 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 GATA2P23769 480 aaPredicted RBP10.4□□□□□ -0.74
LIMS1-201ENST00000332345 SULT1A1P50225 295 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 APOC4P55056 127 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 HBG1P69891 147 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 HBG2P69892 147 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 SLC38A11Q08AI6 406 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 RAB31Q13636 194 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 APRG1Q8IVJ8 170 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 OR8I2Q8N0Y5 310 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 TMEM147Q9BVK8 224 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 MAP6D1Q9H9H5 199 aa10.4□□□□□ -0.74
LIMS1-201ENST00000332345 H2BFSP57053 126 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 DEFB131AP59861 70 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 ATP6V1FQ16864 119 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 TMEM182Q6ZP80 229 aaPredicted RBP10.39□□□□□ -0.75
LIMS1-201ENST00000332345 TMEM252Q8N6L7 170 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 TMEM217Q8N7C4 229 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 OR1B1Q8NGR6 318 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 DCANP1Q8TF63 244 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 SLC25A31Q9H0C2 315 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 SEPSECSQ9HD40 501 aaKnown RBP10.39□□□□□ -0.75
LIMS1-201ENST00000332345 NRN1Q9NPD7 142 aa10.39□□□□□ -0.75
LIMS1-201ENST00000332345 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
LIMS1-201ENST00000332345 KIR2DL5BA0A0G2JN68 375 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 KIR2DL5BA0A0G2JPC4 375 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 UBE2CO00762 179 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 HYPMO75409 117 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 RAP2BP61225 183 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 SNRPD3P62318 126 aaKnown RBP10.38□□□□□ -0.75
LIMS1-201ENST00000332345 LRRC37A5PQ49AS3 106 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 PXDC1Q5TGL8 231 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 KIR2DL5AQ8N109 375 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 STPG3Q8N7X2 389 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 KIR2DL5BQ8NHK3 375 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 UQCC1Q9NVA1 299 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 ALG5Q9Y673 324 aa10.38□□□□□ -0.75
LIMS1-201ENST00000332345 NBEAL2Q6ZNJ1 2754 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 IGSF23A1L1A6 192 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 ZNF98A6NK75 572 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 AGPAT2O15120 278 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 ZNF688P0C7X2 276 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 LINC00869P0C866 280 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 PET100P0DJ07 73 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 PLP1P60201 277 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 ZNF546Q86UE3 836 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 FAM24BQ8N5W8 94 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 PPP1R1CQ8WVI7 109 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 GPR82Q96P67 336 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 RNF24Q9Y225 148 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 HIGD1AQ9Y241 93 aa10.37□□□□□ -0.75
LIMS1-201ENST00000332345 OR5G3P0C626 314 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 RPL35AP18077 110 aaKnown RBP10.36□□□□□ -0.75
LIMS1-201ENST00000332345 ID1P41134 155 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 GALR1P47211 349 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 ZNF124Q15973 351 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 RGS21Q2M5E4 152 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 VWC2Q2TAL6 325 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 SAMD13Q5VXD3 122 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 LEMD1Q68G75 181 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 STHQ8IWL8 128 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 ARL6Q9H0F7 186 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 CSTL1Q9H114 145 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 SLC25A22Q9H936 323 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 OR5AC2Q9NZP5 309 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 DOK5Q9P104 306 aa10.36□□□□□ -0.75
LIMS1-201ENST00000332345 H0YIZ8 118 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 MPC2O95563 127 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 CAMLGP49069 296 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 NHLH2Q02577 135 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 Q6ZRG5 221 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 Q6ZWC4 215 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 MGST2Q99735 147 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 SLC25A39Q9BZJ4 359 aaPredicted RBP10.35□□□□□ -0.75
LIMS1-201ENST00000332345 MED28Q9H204 178 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 WDR83OSQ9Y284 106 aa10.35□□□□□ -0.75
LIMS1-201ENST00000332345 ELOA3CA0A087WX78 387 aaPredicted RBP10.34□□□□□ -0.75
LIMS1-201ENST00000332345 MPDU1O75352 247 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 MEOX2P50222 304 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 EWSR1Q01844 656 aaKnown RBP eCLIP10.34□□□□□ -0.75
LIMS1-201ENST00000332345 BAXQ07812 192 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 PSMG4Q5JS54 123 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 SHANK2-AS3Q9BTD1 123 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 RSG1Q9BU20 258 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 RNF126Q9BV68 326 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 TP53TG1Q9Y2A0 90 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 AGRNO00468 2067 aa10.34□□□□□ -0.75
LIMS1-201ENST00000332345 H3BRN7 92 aa10.33□□□□□ -0.76
LIMS1-201ENST00000332345 RPL7P18124 248 aaKnown RBP10.33□□□□□ -0.76
LIMS1-201ENST00000332345 OR5C1Q8NGR4 320 aa10.33□□□□□ -0.76
LIMS1-201ENST00000332345 CHAC2Q8WUX2 184 aa10.33□□□□□ -0.76
LIMS1-201ENST00000332345 OVOL2Q9BRP0 275 aa10.33□□□□□ -0.76
LIMS1-201ENST00000332345 ARV1Q9H2C2 271 aa10.33□□□□□ -0.76
LIMS1-201ENST00000332345 SLC25A32Q9H2D1 315 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms