RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 HNRNPCP07910 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 ORM2P19652 201 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 NPPCP23582 126 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 ATP6V0CP27449 155 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 PATE2Q6UY27 113 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 HSD17B11Q8NBQ5 300 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 TMEM37Q8WXS4 190 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 PSMG3Q9BT73 122 aaPredicted RBP9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 PBDC1Q9BVG4 233 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 RABAC1Q9UI14 185 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 RFNGQ9Y644 331 aa9.58□□□□□ -0.88
CHMP2A-201ENST00000312547 IGHV3-49A0A0A0MS15 119 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 CHEK1O14757 476 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 BUB3O43684 328 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 IGLL1P15814 213 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 INSL3P51460 131 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 NKX2-5P52952 324 aaPredicted RBP9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 C9orf66Q5T8R8 295 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 Q6ZRG5 221 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 OR1B1Q8NGR6 318 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 OR2G3Q8NGZ4 309 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 ST8SIA2Q92186 375 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 RHPN1-AS1Q9BWJ2 59 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 DOK5Q9P104 306 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 MLXQ9UH92 298 aa9.57□□□□□ -0.88
CHMP2A-201ENST00000312547 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 H3BRN7 92 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 SAP30O75446 220 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 IGLV1-51P01701 117 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 DEFB114Q30KQ6 69 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 STOML3Q8TAV4 291 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 GNPNAT1Q96EK6 184 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 SHANK2-AS3Q9BTD1 123 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 ZNF471Q9BX82 626 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 SLC25A39Q9BZJ4 359 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 SH3BGRL3Q9H299 93 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 DNAJC4Q9NNZ3 241 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 TECRQ9NZ01 308 aaKnown RBP9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 HIGD1AQ9Y241 93 aa9.56□□□□□ -0.88
CHMP2A-201ENST00000312547 PRKDCP78527 4128 aaKnown RBP9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 IGHV3OR16-13A0A075B7E8 117 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 IGHV3-74A0A0B4J1X5 117 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 A0A1W2PS18 150 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 BOLA2-SMG1P6H3BVE0 249 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 COX7A2P2O60397 106 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 OR5G3P0C626 314 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 SPP1P10451 314 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 BMI1P35226 326 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 SERF2P84101 59 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 FFAR4Q5NUL3 377 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 FAM90A2PQ658T7 463 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 C16orf54Q6UWD8 224 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 OR1L4Q8NGR5 311 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 GATAD1Q8WUU5 269 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 GLMPQ8WWB7 406 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 PFDN5Q99471 154 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 GPR61Q9BZJ8 451 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 PFDN2Q9UHV9 154 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 NOTCH3Q9UM47 2321 aa9.55□□□□□ -0.88
CHMP2A-201ENST00000312547 IGHV3-66A0A0C4DH42 116 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 ZNF98A6NK75 572 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 EIF5AP63241 154 aaKnown RBP9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 OXLD1Q5BKU9 147 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 C1orf194Q5T5A4 169 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 SAMD5Q5TGI4 173 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 MORN5Q5VZ52 161 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 C10orf113Q5VZT2 155 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 BAP18Q8IXM2 172 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 OR2K2Q8NGT1 345 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 DYNLRB2Q8TF09 96 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 NARS2Q96I59 477 aaKnown RBP9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 UHRF2Q96PU4 802 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 RNF2Q99496 336 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 SCRT1Q9BWW7 348 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 TMEM231Q9H6L2 316 aa9.54□□□□□ -0.88
CHMP2A-201ENST00000312547 TPT1P13693 172 aaKnown RBP9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 C4BPBP20851 252 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 S100A7P31151 101 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 CD300EQ496F6 205 aaPredicted RBP9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 LINC00305Q7Z4B0 112 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 SLC51BQ86UW2 128 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 PPP1R14BQ96C90 147 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 GRAMD2BQ96HH9 432 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 SLC25A32Q9H2D1 315 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 SEPSECSQ9HD40 501 aaKnown RBP9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 PLA2G2EQ9NZK7 142 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 BOLA1Q9Y3E2 137 aa9.53□□□□□ -0.88
CHMP2A-201ENST00000312547 TRAV25A0A0B4J276 109 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 IZUMO1RA6ND01 250 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 CD5P06127 495 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 SEC11BP0C7V7 166 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 M6PRP20645 277 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 RAB2AP61019 212 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 EGFEM1PQ0D2K5 195 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 ACOT6Q3I5F7 207 aaPredicted RBP9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 LEMD1Q68G75 181 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 TCF24Q7RTU0 167 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms