RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 PAIP2BQ9ULR5 123 aaKnown RBP18.12■□□□□ 0.49
U2AF1-201ENST00000291552 TMED3Q9Y3Q3 217 aa18.12■□□□□ 0.49
U2AF1-201ENST00000291552 ZNF705FA8MVS1 300 aaPredicted RBP18.11■□□□□ 0.49
U2AF1-201ENST00000291552 SYNGR2O43760 224 aa18.11■□□□□ 0.49
U2AF1-201ENST00000291552 IGKV3-20P01619 116 aa18.11■□□□□ 0.49
U2AF1-201ENST00000291552 ZNF705DP0CH99 300 aaPredicted RBP18.11■□□□□ 0.49
U2AF1-201ENST00000291552 ZNF705BP0CI00 300 aaPredicted RBP18.11■□□□□ 0.49
U2AF1-201ENST00000291552 FXYD7P58549 80 aa18.11■□□□□ 0.49
U2AF1-201ENST00000291552 FOXI2Q6ZQN5 318 aa18.11■□□□□ 0.49
U2AF1-201ENST00000291552 ZNF709Q8N972 641 aa18.11■□□□□ 0.49
U2AF1-201ENST00000291552 PFDN2Q9UHV9 154 aa18.11■□□□□ 0.49
U2AF1-201ENST00000291552 SNRPGP15A8MWD9 76 aa18.1■□□□□ 0.49
U2AF1-201ENST00000291552 MED6O75586 246 aa18.1■□□□□ 0.49
U2AF1-201ENST00000291552 FABP1P07148 127 aa18.1■□□□□ 0.49
U2AF1-201ENST00000291552 HOXB5P09067 269 aa18.1■□□□□ 0.49
U2AF1-201ENST00000291552 GGNBP1Q5YKI7 109 aa18.1■□□□□ 0.49
U2AF1-201ENST00000291552 CENPSQ8N2Z9 138 aa18.1■□□□□ 0.49
U2AF1-201ENST00000291552 DEDD2Q8WXF8 326 aa18.1■□□□□ 0.49
U2AF1-201ENST00000291552 WRBO00258 174 aa18.09■□□□□ 0.49
U2AF1-201ENST00000291552 TMEM182Q6ZP80 229 aaPredicted RBP18.09■□□□□ 0.49
U2AF1-201ENST00000291552 CLUHP3Q96NS8 147 aa18.09■□□□□ 0.49
U2AF1-201ENST00000291552 NEU1Q99519 415 aa18.09■□□□□ 0.49
U2AF1-201ENST00000291552 RNF126Q9BV68 326 aa18.09■□□□□ 0.49
U2AF1-201ENST00000291552 SRRQ9GZT4 340 aa18.09■□□□□ 0.49
U2AF1-201ENST00000291552 SLC25A32Q9H2D1 315 aa18.09■□□□□ 0.49
U2AF1-201ENST00000291552 F6UB75 175 aa18.08■□□□□ 0.48
U2AF1-201ENST00000291552 AMBPP02760 352 aa18.08■□□□□ 0.48
U2AF1-201ENST00000291552 S100A5P33763 92 aa18.08■□□□□ 0.48
U2AF1-201ENST00000291552 OR8I2Q8N0Y5 310 aa18.08■□□□□ 0.48
U2AF1-201ENST00000291552 PPP1R14BQ96C90 147 aa18.08■□□□□ 0.48
U2AF1-201ENST00000291552 C20orf173Q96LM9 149 aa18.08■□□□□ 0.48
U2AF1-201ENST00000291552 CIB3Q96Q77 187 aaPredicted RBP18.08■□□□□ 0.48
U2AF1-201ENST00000291552 SLC35B3Q9H1N7 401 aa18.08■□□□□ 0.48
U2AF1-201ENST00000291552 CCDC160A6NGH7 325 aa18.07■□□□□ 0.48
U2AF1-201ENST00000291552 H3BP45 60 aa18.07■□□□□ 0.48
U2AF1-201ENST00000291552 ISLRO14498 428 aa18.07■□□□□ 0.48
U2AF1-201ENST00000291552 GATA2P23769 480 aaPredicted RBP18.07■□□□□ 0.48
U2AF1-201ENST00000291552 ID1P41134 155 aa18.07■□□□□ 0.48
U2AF1-201ENST00000291552 PAX9P55771 341 aa18.07■□□□□ 0.48
U2AF1-201ENST00000291552 COQ8AQ8NI60 647 aa18.07■□□□□ 0.48
U2AF1-201ENST00000291552 KIAA1109Q2LD37 5005 aa18.06■□□□□ 0.48
U2AF1-201ENST00000291552 DEFB131BA0A096LNP1 70 aa18.06■□□□□ 0.48
U2AF1-201ENST00000291552 ADAP1O75689 374 aa18.06■□□□□ 0.48
U2AF1-201ENST00000291552 A0A0J9YX75 114 aa18.05■□□□□ 0.48
U2AF1-201ENST00000291552 UBE2MP61081 183 aaKnown RBP18.05■□□□□ 0.48
U2AF1-201ENST00000291552 SPANXN5Q5MJ07 72 aa18.05■□□□□ 0.48
U2AF1-201ENST00000291552 ACOT7LQ6ZUV0 252 aa18.05■□□□□ 0.48
U2AF1-201ENST00000291552 OR4B1Q8NGF8 309 aa18.05■□□□□ 0.48
U2AF1-201ENST00000291552 C9orf170A2RU37 121 aa18.04■□□□□ 0.48
U2AF1-201ENST00000291552 ZNF98A6NK75 572 aa18.04■□□□□ 0.48
U2AF1-201ENST00000291552 BAK1Q16611 211 aa18.04■□□□□ 0.48
U2AF1-201ENST00000291552 FAM78BQ5VT40 261 aa18.04■□□□□ 0.48
U2AF1-201ENST00000291552 SLC45A2Q9UMX9 530 aa18.04■□□□□ 0.48
U2AF1-201ENST00000291552 FLVCR2Q9UPI3 526 aa18.04■□□□□ 0.48
U2AF1-201ENST00000291552 PKHD1P08F94 4074 aa18.03■□□□□ 0.48
U2AF1-201ENST00000291552 IGHV3OR16-12A0A075B7B8 117 aa18.03■□□□□ 0.48
U2AF1-201ENST00000291552 A8MTW9 85 aa18.03■□□□□ 0.48
U2AF1-201ENST00000291552 CFDP00746 253 aaPredicted RBP18.03■□□□□ 0.48
U2AF1-201ENST00000291552 POLR2GP62487 172 aaKnown RBP eCLIP18.03■□□□□ 0.48
U2AF1-201ENST00000291552 RPP30P78346 268 aaKnown RBP18.03■□□□□ 0.48
U2AF1-201ENST00000291552 ID3Q02535 119 aa18.03■□□□□ 0.48
U2AF1-201ENST00000291552 SPATA31B1PQ5VZV4 182 aa18.03■□□□□ 0.48
U2AF1-201ENST00000291552 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.03■□□□□ 0.48
U2AF1-201ENST00000291552 C1orf158Q8N1D5 194 aa18.03■□□□□ 0.48
U2AF1-201ENST00000291552 SLC25A22Q9H936 323 aa18.03■□□□□ 0.48
U2AF1-201ENST00000291552 NDUFB6O95139 128 aa18.02■□□□□ 0.48
U2AF1-201ENST00000291552 EMP1P54849 157 aa18.02■□□□□ 0.48
U2AF1-201ENST00000291552 AKR1C1Q04828 323 aa18.02■□□□□ 0.48
U2AF1-201ENST00000291552 BPIFCQ8NFQ6 507 aa18.02■□□□□ 0.48
U2AF1-201ENST00000291552 STRAPQ9Y3F4 350 aaKnown RBP18.02■□□□□ 0.48
U2AF1-201ENST00000291552 SMIM9A6NGZ8 99 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 ORM2P19652 201 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 GALR1P47211 349 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 MEOX2P50222 304 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 PSG9Q00887 426 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 SPANXN2Q5MJ10 180 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 AMTNQ6UX39 209 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 OR4D5Q8NGN0 318 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 C16orf92Q96LL3 132 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 SDHCQ99643 169 aaPredicted RBP18.01■□□□□ 0.47
U2AF1-201ENST00000291552 RSG1Q9BU20 258 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 RFNGQ9Y644 331 aa18.01■□□□□ 0.47
U2AF1-201ENST00000291552 PMS2P5A8MQ11 134 aa18■□□□□ 0.47
U2AF1-201ENST00000291552 CCNKO75909 580 aa18■□□□□ 0.47
U2AF1-201ENST00000291552 BTCP35070 178 aa18■□□□□ 0.47
U2AF1-201ENST00000291552 SAMD13Q5VXD3 122 aa18■□□□□ 0.47
U2AF1-201ENST00000291552 EBLN2Q6P2I7 272 aa18■□□□□ 0.47
U2AF1-201ENST00000291552 RPRMQ9NS64 109 aa18■□□□□ 0.47
U2AF1-201ENST00000291552 TMEM189A5PLL7 270 aa17.99■□□□□ 0.47
U2AF1-201ENST00000291552 SPART-AS1P0CW21 52 aa17.99■□□□□ 0.47
U2AF1-201ENST00000291552 TMEM144Q7Z5S9 345 aa17.99■□□□□ 0.47
U2AF1-201ENST00000291552 OR1B1Q8NGR6 318 aa17.99■□□□□ 0.47
U2AF1-201ENST00000291552 DOK5Q9P104 306 aa17.99■□□□□ 0.47
U2AF1-201ENST00000291552 DKK2Q9UBU2 259 aa17.99■□□□□ 0.47
U2AF1-201ENST00000291552 TRAV8-2A0A0B4J237 113 aa17.98■□□□□ 0.47
U2AF1-201ENST00000291552 H3BRN7 92 aa17.98■□□□□ 0.47
U2AF1-201ENST00000291552 ZNF701M0R085 212 aaPredicted RBP17.98■□□□□ 0.47
U2AF1-201ENST00000291552 FAM222AQ5U5X8 452 aa17.98■□□□□ 0.47
U2AF1-201ENST00000291552 IGFL4Q6B9Z1 124 aa17.98■□□□□ 0.47
U2AF1-201ENST00000291552 NDUFAF3Q9BU61 184 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms