RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 MST1LQ2TV78 715 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 FBLN7Q53RD9 439 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 PSMG4Q5JS54 123 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 SLC25A48Q6ZT89 311 aaKnown RBP9.44□□□□□ -0.9
NOD1-201ENST00000222823 ST6GALNAC3Q8NDV1 305 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 ADMP35318 185 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 RNF5Q99942 180 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 RFNGQ9Y644 331 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 OOSP1A8MZH6 123 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 PPIFP30405 207 aaKnown RBP9.43□□□□□ -0.9
NOD1-201ENST00000222823 C15orf32Q32M92 178 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 NEUROG1Q92886 237 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 MRAP2Q96G30 205 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 MBNL3Q9NUK0 354 aaKnown RBP9.43□□□□□ -0.9
NOD1-201ENST00000222823 TRAV21A0A0B4J279 112 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 A0A1B0GWJ7 208 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 SPATA31B1PQ5VZV4 182 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 C20orf204Q6ZNR8 217 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 VMO1Q7Z5L0 202 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 C1QL4Q86Z23 238 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 TMEM242Q9NWH2 141 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 COLCA2A8K830 154 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 NPIPB5A8MRT5 1133 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 KLRD1Q13241 179 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 KLF17Q5JT82 389 aaPredicted RBP9.43□□□□□ -0.9
NOD1-201ENST00000222823 LDLRAD2Q5SZI1 272 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 TPTE2P1Q5T6R2 138 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 Q6ZRM9 215 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 BEX4Q9NWD9 120 aaPredicted RBP9.43□□□□□ -0.9
NOD1-201ENST00000222823 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 A0A1B0GW64 132 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 FAM169BQ8N8A8 192 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 TSKUQ8WUA8 353 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 GAFA1Q96PS6 74 aa9.43□□□□□ -0.9
NOD1-201ENST00000222823 A0A0G2JRQ6 117 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 A0A1B0GV90 55 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 DKK1O94907 266 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 SMIM13P0DJ93 91 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 MINOS1Q5TGZ0 78 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 HS3ST6Q96QI5 342 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 MINOS1-NBL1R4GNA1 71 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 PCDH15Q96QU1 1955 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 H0YJW9 148 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 PPBPP02775 128 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 LINC00614P0C842 121 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 VDAC2P45880 294 aaPredicted RBP9.42□□□□□ -0.9
NOD1-201ENST00000222823 LHFPL4Q7Z7J7 247 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 TMEM219Q86XT9 240 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 SSC4DQ8WTU2 575 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 MGST2Q99735 147 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 PEF1Q9UBV8 284 aaKnown RBP9.42□□□□□ -0.9
NOD1-201ENST00000222823 DUSP14O95147 198 aaKnown RBP9.42□□□□□ -0.9
NOD1-201ENST00000222823 NTF4P34130 210 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 C5orf64Q2M2E5 130 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 LINC01551Q86U37 167 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 TMEM101Q96IK0 257 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 GNB1LQ9BYB4 327 aa9.42□□□□□ -0.9
NOD1-201ENST00000222823 YLPM1P49750 1951 aaKnown RBP9.42□□□□□ -0.9
NOD1-201ENST00000222823 LY6HO94772 140 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 IL15RAQ13261 267 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 PIEZO1Q92508 2521 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 SCRT1Q9BWW7 348 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 CD33P20138 364 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 NUDT10Q8NFP7 164 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 OR13C6PQ8NH95 151 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 NUDT11Q96G61 164 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 C15orf62A8K5M9 175 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 LEPP41159 167 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 EMP1P54849 157 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 C11orf44Q8N8P7 122 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 TRGV9Q99603 122 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 SLC25A39Q9BZJ4 359 aaPredicted RBP9.41□□□□□ -0.9
NOD1-201ENST00000222823 SIGLEC9Q9Y336 463 aa9.41□□□□□ -0.9
NOD1-201ENST00000222823 C10orf142B7Z368 130 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 CXCL1P09341 107 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 PRB4P10163 310 aaPredicted RBP9.4□□□□□ -0.9
NOD1-201ENST00000222823 OR10J3Q5JRS4 329 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 DERL1Q9BUN8 251 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 NXT2Q9NPJ8 142 aaKnown RBP9.4□□□□□ -0.9
NOD1-201ENST00000222823 HBDP02042 147 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 C21orf62-AS1Q17RA5 79 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 ZNF585BQ52M93 769 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 C10orf91Q5T1B1 145 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 C2orf88Q9BSF0 95 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 LIME1Q9H400 295 aa9.4□□□□□ -0.9
NOD1-201ENST00000222823 ANKHD1Q8IWZ3 2542 aaKnown RBP9.4□□□□□ -0.91
NOD1-201ENST00000222823 RNASE1P07998 156 aaKnown RBP9.4□□□□□ -0.91
NOD1-201ENST00000222823 GNLYP22749 145 aa9.4□□□□□ -0.91
NOD1-201ENST00000222823 RPL15P61313 204 aaKnown RBP9.4□□□□□ -0.91
NOD1-201ENST00000222823 FOXL1Q12952 345 aa9.4□□□□□ -0.91
NOD1-201ENST00000222823 LYPD2Q6UXB3 125 aa9.4□□□□□ -0.91
NOD1-201ENST00000222823 B4DSR2 109 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 SRD5A1P18405 259 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 DSCR9P59020 149 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 Q6ZSR3 168 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 IGKV1-6A0A0C4DH72 117 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms