RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 RNF24Q9Y225 148 aa15.31■□□□□ 0.04
RHBDD3-201ENST00000216085 PLP1P60201 277 aa15.3■□□□□ 0.04
RHBDD3-201ENST00000216085 B2MP61769 119 aa15.3■□□□□ 0.04
RHBDD3-201ENST00000216085 PXMP4Q9Y6I8 212 aa15.3■□□□□ 0.04
RHBDD3-201ENST00000216085 CMYA5Q8N3K9 4069 aa15.3■□□□□ 0.04
RHBDD3-201ENST00000216085 IGHV3-49A0A0A0MS15 119 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 G3V4G9 280 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 CHEK1O14757 476 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 COX7A2P2O60397 106 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 OR5G3P0C626 314 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 EDN2P20800 178 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 TMEM182Q6ZP80 229 aaPredicted RBP15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 RBPMS2Q6ZRY4 209 aaKnown RBP15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 OR1L4Q8NGR5 311 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 PFDN5Q99471 154 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 SLC39A9Q9NUM3 307 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 MLXQ9UH92 298 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 HIGD1AQ9Y241 93 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 ELOA3CA0A087WX78 387 aaPredicted RBP15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 KANTRA0A1W2PQU2 76 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 DEFB114Q30KQ6 69 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 MIC13Q5XKP0 118 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 ADAMTSL5Q6ZMM2 481 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 KCNRGQ8N5I3 272 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 VSIRQ9H7M9 311 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 WFDC1Q9HC57 220 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 DOK5Q9P104 306 aa15.29■□□□□ 0.04
RHBDD3-201ENST00000216085 IGHV3OR16-13A0A075B7E8 117 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 IGHV3-74A0A0B4J1X5 117 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 JTBO76095 146 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 PRR20EP86478 221 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 PRR20CP86479 221 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 PRR20DP86480 221 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 PRR20BP86481 221 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 PRR20AP86496 221 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 CD300EQ496F6 205 aaPredicted RBP15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 ST8SIA2Q92186 375 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 ARPC5LQ9BPX5 153 aa15.28■□□□□ 0.04
RHBDD3-201ENST00000216085 TRAV25A0A0B4J276 109 aa15.27■□□□□ 0.04
RHBDD3-201ENST00000216085 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.03
RHBDD3-201ENST00000216085 IGHV3-66A0A0C4DH42 116 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 HELTA6NFD8 242 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 C1orf194Q5T5A4 169 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 ARV1Q9H2C2 271 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 TIMM9Q9Y5J7 89 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 U3KQE9 123 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 BUB3O43684 328 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 APOHP02749 345 aaPredicted RBP15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 HSD17B11Q8NBQ5 300 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 RNF2Q99496 336 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 RSG1Q9BU20 258 aa15.26■□□□□ 0.03
RHBDD3-201ENST00000216085 NOTCH1P46531 2555 aa15.25■□□□□ 0.03
RHBDD3-201ENST00000216085 RPL11P62913 178 aaKnown RBP15.25■□□□□ 0.03
RHBDD3-201ENST00000216085 PAFAH1B2P68402 229 aa15.25■□□□□ 0.03
RHBDD3-201ENST00000216085 EGFEM1PQ0D2K5 195 aa15.25■□□□□ 0.03
RHBDD3-201ENST00000216085 C10orf113Q5VZT2 155 aa15.25■□□□□ 0.03
RHBDD3-201ENST00000216085 TCF24Q7RTU0 167 aa15.25■□□□□ 0.03
RHBDD3-201ENST00000216085 GNPNAT1Q96EK6 184 aaPredicted RBP15.25■□□□□ 0.03
RHBDD3-201ENST00000216085 DNAJC4Q9NNZ3 241 aa15.25■□□□□ 0.03
RHBDD3-201ENST00000216085 BCL2L11O43521 198 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 C4BPBP20851 252 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 EIF5AP63241 154 aaKnown RBP15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 RPL7L1Q6DKI1 246 aaKnown RBP15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 C16orf54Q6UWD8 224 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 TMEM61Q8N0U2 210 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 GATAD1Q8WUU5 269 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 GPR82Q96P67 336 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 SLC25A39Q9BZJ4 359 aaPredicted RBP15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 ZNF256Q9Y2P7 627 aaPredicted RBP15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 CXCL2P19875 107 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 GUCA2BQ16661 112 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 OR8I2Q8N0Y5 310 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 SPAG8Q99932 426 aaPredicted RBP15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 PSMG3Q9BT73 122 aaPredicted RBP15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 SHANK2-AS3Q9BTD1 123 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 SLC25A22Q9H936 323 aa15.24■□□□□ 0.03
RHBDD3-201ENST00000216085 ZNF98A6NK75 572 aa15.23■□□□□ 0.03
RHBDD3-201ENST00000216085 H3BRN7 92 aa15.23■□□□□ 0.03
RHBDD3-201ENST00000216085 TSPAN4O14817 238 aa15.23■□□□□ 0.03
RHBDD3-201ENST00000216085 FFAR4Q5NUL3 377 aa15.23■□□□□ 0.03
RHBDD3-201ENST00000216085 SIGLEC15Q6ZMC9 328 aa15.23■□□□□ 0.03
RHBDD3-201ENST00000216085 TMUB2Q71RG4 321 aa15.23■□□□□ 0.03
RHBDD3-201ENST00000216085 LINC00305Q7Z4B0 112 aa15.23■□□□□ 0.03
RHBDD3-201ENST00000216085 BEAN1Q3B7T3 259 aa15.22■□□□□ 0.03
RHBDD3-201ENST00000216085 KPRPQ5T749 579 aaPredicted RBP15.22■□□□□ 0.03
RHBDD3-201ENST00000216085 UHRF2Q96PU4 802 aa15.22■□□□□ 0.03
RHBDD3-201ENST00000216085 ZNF471Q9BX82 626 aaPredicted RBP15.22■□□□□ 0.03
RHBDD3-201ENST00000216085 GP9P14770 177 aa15.21■□□□□ 0.03
RHBDD3-201ENST00000216085 ATP6V0CP27449 155 aa15.21■□□□□ 0.03
RHBDD3-201ENST00000216085 GALR1P47211 349 aa15.21■□□□□ 0.03
RHBDD3-201ENST00000216085 GLMPQ8WWB7 406 aa15.21■□□□□ 0.03
RHBDD3-201ENST00000216085 SELENOKQ9Y6D0 94 aa15.21■□□□□ 0.03
RHBDD3-201ENST00000216085 OR4C46A6NHA9 309 aa15.21■□□□□ 0.02
RHBDD3-201ENST00000216085 RPL7P18124 248 aaKnown RBP15.21■□□□□ 0.02
RHBDD3-201ENST00000216085 SERF2P84101 59 aa15.21■□□□□ 0.02
RHBDD3-201ENST00000216085 ACOT6Q3I5F7 207 aaPredicted RBP15.21■□□□□ 0.02
RHBDD3-201ENST00000216085 PATE2Q6UY27 113 aa15.21■□□□□ 0.02
RHBDD3-201ENST00000216085 GTSCR1Q86UQ5 136 aa15.21■□□□□ 0.02
RHBDD3-201ENST00000216085 TMEM37Q8WXS4 190 aa15.21■□□□□ 0.02
RHBDD3-201ENST00000216085 SCRT1Q9BWW7 348 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms