RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 COMPP49747 757 aaPredicted RBP12.88□□□□□ -0.35
SNAP47-213ENST00000617596 CEBPGP53567 150 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 RAB11AP62491 216 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 CX3CL1P78423 397 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 NDPQ00604 133 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 PRCDQ00LT1 54 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 ACTL10Q5JWF8 245 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 C5orf56Q8N8D9 126 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 OR1L8Q8NGR8 309 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 RASL11BQ9BPW5 248 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
SNAP47-213ENST00000617596 REG1AP05451 166 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 HNF1AP20823 631 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 PCP4P48539 62 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
SNAP47-213ENST00000617596 TMEM267Q0VDI3 215 aaPredicted RBP12.88□□□□□ -0.35
SNAP47-213ENST00000617596 FXYD3Q14802 87 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 TMEM241Q24JQ0 296 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 PDLIM3Q53GG5 364 aaPredicted RBP12.88□□□□□ -0.35
SNAP47-213ENST00000617596 C19orf35Q6ZS72 473 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 OR5C1Q8NGR4 320 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 SRSF12Q8WXF0 261 aaKnown RBP12.88□□□□□ -0.35
SNAP47-213ENST00000617596 RAB40CQ96S21 281 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 C20orf144Q9BQM9 153 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 PLEKHA3Q9HB20 300 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 MOB4Q9Y3A3 225 aa12.88□□□□□ -0.35
SNAP47-213ENST00000617596 LINC01548A6NM66 108 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 INAFM1C9JVW0 142 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 G0S2P27469 103 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
SNAP47-213ENST00000617596 WT1-ASQ06250 92 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 GBGT1Q8N5D6 347 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 TEX29Q8N6K0 151 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 OR51G1Q8NGK1 321 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 ANAPC16Q96DE5 110 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 OR4C12Q96R67 309 aa12.87□□□□□ -0.35
SNAP47-213ENST00000617596 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
SNAP47-213ENST00000617596 IGHV7-81A0A0B4J1V7 117 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 CST7O76096 145 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 AREGP15514 252 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 BLCAPP62952 87 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 Q6ZS46 218 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 TMEM217Q8N7C4 229 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 SSMEM1Q8WWF3 244 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 ATG101Q9BSB4 218 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 ENY2Q9NPA8 101 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 TMEM250H0YL14 139 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 SERF2P84101 59 aa12.86□□□□□ -0.35
SNAP47-213ENST00000617596 F8P00451 2351 aa12.85□□□□□ -0.35
SNAP47-213ENST00000617596 TEX22C9J3V5 150 aa12.85□□□□□ -0.35
SNAP47-213ENST00000617596 TEX38Q6PEX7 206 aa12.85□□□□□ -0.35
SNAP47-213ENST00000617596 ZNF562Q6V9R5 426 aa12.85□□□□□ -0.35
SNAP47-213ENST00000617596 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
SNAP47-213ENST00000617596 TMEM160Q9NX00 188 aa12.85□□□□□ -0.35
SNAP47-213ENST00000617596 GNG13Q9P2W3 67 aa12.85□□□□□ -0.35
SNAP47-213ENST00000617596 IGLC7A0M8Q6 106 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 IFNA5P01569 189 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 HLA-DRB1P01911 266 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 ARPC1AQ92747 370 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 VPREB3Q9UKI3 123 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 C15orf62A8K5M9 175 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 EGR2P11161 476 aaPredicted RBP12.84□□□□□ -0.35
SNAP47-213ENST00000617596 SRD5A1P18405 259 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 ARL16Q0P5N6 197 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 OR8G2PQ6IF36 304 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 MRPL41Q8IXM3 137 aaKnown RBP12.84□□□□□ -0.35
SNAP47-213ENST00000617596 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNAP47-213ENST00000617596 CIB3Q96Q77 187 aaPredicted RBP12.84□□□□□ -0.35
SNAP47-213ENST00000617596 NAGKQ9UJ70 344 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 LINC00527Q9UJ94 153 aa12.84□□□□□ -0.35
SNAP47-213ENST00000617596 H7BYZ3 331 aa12.83□□□□□ -0.36
SNAP47-213ENST00000617596 BSXQ3C1V8 233 aa12.83□□□□□ -0.36
SNAP47-213ENST00000617596 HAPLN4Q86UW8 402 aa12.83□□□□□ -0.36
SNAP47-213ENST00000617596 SLC24A4Q8NFF2 622 aa12.83□□□□□ -0.36
SNAP47-213ENST00000617596 ATP6V0E1O15342 81 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 GALR1P47211 349 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 C16orf82Q7Z2V1 217 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 MIEN1Q9BRT3 115 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 ESM1Q9NQ30 184 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 CDC42EP3Q9UKI2 254 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 A0A1W2PN81 502 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 MAP1LC3B2A6NCE7 125 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 CHRNA7P36544 502 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 CNN1P51911 297 aaKnown RBP12.82□□□□□ -0.36
SNAP47-213ENST00000617596 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
SNAP47-213ENST00000617596 ASPHD1Q5U4P2 390 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 TMEM14EPQ6UXP3 125 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 MAP1LC3BQ9GZQ8 125 aa12.82□□□□□ -0.36
SNAP47-213ENST00000617596 RNASE2P10153 161 aaKnown RBP12.81□□□□□ -0.36
SNAP47-213ENST00000617596 NPY1RP25929 384 aa12.81□□□□□ -0.36
SNAP47-213ENST00000617596 ECSCRQ19T08 205 aa12.81□□□□□ -0.36
SNAP47-213ENST00000617596 KCNIP4Q6PIL6 250 aa12.81□□□□□ -0.36
SNAP47-213ENST00000617596 FN1P02751 2386 aaKnown RBP12.8□□□□□ -0.36
SNAP47-213ENST00000617596 DNAJC9-AS1A6NH13 148 aa12.8□□□□□ -0.36
SNAP47-213ENST00000617596 G3V318 75 aa12.8□□□□□ -0.36
SNAP47-213ENST00000617596 TMEM95Q3KNT9 176 aa12.8□□□□□ -0.36
SNAP47-213ENST00000617596 SMIM7Q9BQ49 75 aa12.8□□□□□ -0.36
SNAP47-213ENST00000617596 NSD1Q96L73 2696 aaPredicted RBP12.8□□□□□ -0.36
SNAP47-213ENST00000617596 PMS2P5A8MQ11 134 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms