RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 LINC00476Q8WZB0 136 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 SLC35E1Q96K37 410 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 PBDC1Q9BVG4 233 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 SRRQ9GZT4 340 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 PAIP2BQ9ULR5 123 aaKnown RBP11.97□□□□□ -0.49
TUBE1-206ENST00000603722 ZNF701M0R085 212 aaPredicted RBP11.96□□□□□ -0.49
TUBE1-206ENST00000603722 GPX4P36969 197 aaPredicted RBP11.96□□□□□ -0.49
TUBE1-206ENST00000603722 AP2S1P53680 142 aaPredicted RBP11.96□□□□□ -0.49
TUBE1-206ENST00000603722 ATP5IP56385 69 aaPredicted RBP11.96□□□□□ -0.49
TUBE1-206ENST00000603722 ZNF90Q03938 601 aa11.96□□□□□ -0.49
TUBE1-206ENST00000603722 GAMTQ14353 236 aa11.96□□□□□ -0.49
TUBE1-206ENST00000603722 RNF125Q96EQ8 232 aa11.96□□□□□ -0.49
TUBE1-206ENST00000603722 C11orf68Q9H3H3 251 aaKnown RBP11.96□□□□□ -0.49
TUBE1-206ENST00000603722 TMED3Q9Y3Q3 217 aa11.96□□□□□ -0.49
TUBE1-206ENST00000603722 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 DEFB4AO15263 64 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 BUB3O43684 328 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 LY6G6CO95867 125 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 HOXB5P09067 269 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 SLC25A6P12236 298 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 C4BPBP20851 252 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 INPP1P49441 399 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 RAB11AP62491 216 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 TRIQKQ629K1 86 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 SIGLEC15Q6ZMC9 328 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 MAGT1Q9H0U3 335 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 NRN1Q9NPD7 142 aa11.95□□□□□ -0.5
TUBE1-206ENST00000603722 KLK5Q9Y337 293 aaPredicted RBP11.95□□□□□ -0.5
TUBE1-206ENST00000603722 FAM90A26D6RGX4 464 aa11.94□□□□□ -0.5
TUBE1-206ENST00000603722 GIG44P09565 113 aaPredicted RBP11.94□□□□□ -0.5
TUBE1-206ENST00000603722 SPP1P10451 314 aa11.94□□□□□ -0.5
TUBE1-206ENST00000603722 NANOS2P60321 138 aaKnown RBP11.94□□□□□ -0.5
TUBE1-206ENST00000603722 BAK1Q16611 211 aa11.94□□□□□ -0.5
TUBE1-206ENST00000603722 MORN3Q6PF18 240 aaPredicted RBP11.94□□□□□ -0.5
TUBE1-206ENST00000603722 C11orf45Q8TAV5 145 aa11.94□□□□□ -0.5
TUBE1-206ENST00000603722 PHLDA1Q8WV24 401 aaPredicted RBP11.94□□□□□ -0.5
TUBE1-206ENST00000603722 FBXL17Q9UF56 701 aa11.94□□□□□ -0.5
TUBE1-206ENST00000603722 WRBO00258 174 aa11.93□□□□□ -0.5
TUBE1-206ENST00000603722 MED6O75586 246 aa11.93□□□□□ -0.5
TUBE1-206ENST00000603722 NUP62P37198 522 aaPredicted RBP11.93□□□□□ -0.5
TUBE1-206ENST00000603722 LYZP61626 148 aa11.93□□□□□ -0.5
TUBE1-206ENST00000603722 SNRPD3P62318 126 aaKnown RBP11.93□□□□□ -0.5
TUBE1-206ENST00000603722 GGNBP1Q5YKI7 109 aa11.93□□□□□ -0.5
TUBE1-206ENST00000603722 OR8G2PQ6IF36 304 aa11.93□□□□□ -0.5
TUBE1-206ENST00000603722 CIB3Q96Q77 187 aaPredicted RBP11.93□□□□□ -0.5
TUBE1-206ENST00000603722 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
TUBE1-206ENST00000603722 LINC00854A0A1B0GVQ3 168 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 SYNGR2O43760 224 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 FABP1P07148 127 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 UBE2MP61081 183 aaKnown RBP11.92□□□□□ -0.5
TUBE1-206ENST00000603722 OR2F1Q13607 317 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 TMEM41BQ5BJD5 291 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 MFFQ9GZY8 342 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 CLEC5AQ9NY25 188 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 PFDN2Q9UHV9 154 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 FLVCR2Q9UPI3 526 aa11.92□□□□□ -0.5
TUBE1-206ENST00000603722 C9orf170A2RU37 121 aa11.91□□□□□ -0.5
TUBE1-206ENST00000603722 NAP1L6A6NFF2 107 aa11.91□□□□□ -0.5
TUBE1-206ENST00000603722 H3BP45 60 aa11.91□□□□□ -0.5
TUBE1-206ENST00000603722 ADAP1O75689 374 aa11.91□□□□□ -0.5
TUBE1-206ENST00000603722 NDUFB6O95139 128 aa11.91□□□□□ -0.5
TUBE1-206ENST00000603722 RPP30P78346 268 aaKnown RBP11.91□□□□□ -0.5
TUBE1-206ENST00000603722 Q8NAQ8 132 aa11.91□□□□□ -0.5
TUBE1-206ENST00000603722 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.5
TUBE1-206ENST00000603722 IGHV4-28A0A0C4DH34 117 aa11.9□□□□□ -0.5
TUBE1-206ENST00000603722 SNRPGP15A8MWD9 76 aa11.9□□□□□ -0.5
TUBE1-206ENST00000603722 SPANXN5Q5MJ07 72 aa11.9□□□□□ -0.5
TUBE1-206ENST00000603722 THAP8Q8NA92 274 aa11.9□□□□□ -0.5
TUBE1-206ENST00000603722 PPP1R14BQ96C90 147 aa11.9□□□□□ -0.5
TUBE1-206ENST00000603722 TRGV9Q99603 122 aa11.9□□□□□ -0.5
TUBE1-206ENST00000603722 SDHCQ99643 169 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-206ENST00000603722 SEPSECSQ9HD40 501 aaKnown RBP11.9□□□□□ -0.5
TUBE1-206ENST00000603722 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-206ENST00000603722 PRSS46E5RG02 174 aa11.89□□□□□ -0.51
TUBE1-206ENST00000603722 GSG1LQ6UXU4 331 aa11.89□□□□□ -0.51
TUBE1-206ENST00000603722 COQ8AQ8NI60 647 aa11.89□□□□□ -0.51
TUBE1-206ENST00000603722 WDR12Q9GZL7 423 aaKnown RBP11.89□□□□□ -0.51
TUBE1-206ENST00000603722 X6R8D5 127 aa11.89□□□□□ -0.51
TUBE1-206ENST00000603722 H3BMM0 161 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 OR4E1P0C645 316 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 RBMY1A1P0DJD3 496 aaKnown RBP11.88□□□□□ -0.51
TUBE1-206ENST00000603722 RBMY1CP0DJD4 496 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 MIFP14174 115 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 ANXA7P20073 488 aaKnown RBP11.88□□□□□ -0.51
TUBE1-206ENST00000603722 BTCP35070 178 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
TUBE1-206ENST00000603722 RBMY1FQ15415 496 aaKnown RBP11.88□□□□□ -0.51
TUBE1-206ENST00000603722 ACOT7LQ6ZUV0 252 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 CSNK1G2-AS1Q8NCQ2 148 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 LINC00052Q96N35 136 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 TBC1D24Q9ULP9 559 aa11.88□□□□□ -0.51
TUBE1-206ENST00000603722 STRAPQ9Y3F4 350 aaKnown RBP11.88□□□□□ -0.51
TUBE1-206ENST00000603722 CENPXA8MT69 81 aa11.87□□□□□ -0.51
TUBE1-206ENST00000603722 IL7P13232 177 aa11.87□□□□□ -0.51
TUBE1-206ENST00000603722 HLA-DRB4P13762 266 aa11.87□□□□□ -0.51
TUBE1-206ENST00000603722 NKX2-1P43699 371 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-206ENST00000603722 DEFB1P60022 68 aa11.87□□□□□ -0.51
TUBE1-206ENST00000603722 NUTF2P61970 127 aaKnown RBP11.87□□□□□ -0.51
TUBE1-206ENST00000603722 AKR1C1Q04828 323 aa11.87□□□□□ -0.51
TUBE1-206ENST00000603722 C4orf46Q504U0 113 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms