RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 NPY1RP25929 384 aa13.7□□□□□ -0.22
PPFIA3-207ENST00000602716 GALR1P47211 349 aa13.7□□□□□ -0.22
PPFIA3-207ENST00000602716 FXYD3Q14802 87 aa13.7□□□□□ -0.22
PPFIA3-207ENST00000602716 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
PPFIA3-207ENST00000602716 PITPNC1Q9UKF7 332 aa13.7□□□□□ -0.22
PPFIA3-207ENST00000602716 LINC01548A6NM66 108 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 CNIH1O95406 144 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 NPPCP23582 126 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 DNLZQ5SXM8 178 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 SSMEM1Q8WWF3 244 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 ANAPC16Q96DE5 110 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 OR5B12Q96R08 314 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 C11orf94C9JXX5 98 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 SOX15O60248 233 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 FABP4P15090 132 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 MFAP2P55001 183 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 BPIFB3P59826 476 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 RPP30P78346 268 aaKnown RBP13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 GCSAMLQ5JQS6 135 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 ASPHD1Q5U4P2 390 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 ELOVL1Q9BW60 279 aa13.69□□□□□ -0.22
PPFIA3-207ENST00000602716 MXRA5Q9NR99 2828 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 A0A1W2PN81 502 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 MPDU1O75352 247 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 HLA-DRB1P01911 266 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 CHRNA7P36544 502 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 ARPC1AQ92747 370 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 INS-IGF2F8WCM5 200 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 EGR2P11161 476 aaPredicted RBP13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 HIST1H1BP16401 226 aaKnown RBP13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 IER3P46695 156 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 HIST1H2BLQ99880 126 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 RASL11BQ9BPW5 248 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 PRDM13Q9H4Q3 707 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 C1RLQ9NZP8 487 aa13.68□□□□□ -0.22
PPFIA3-207ENST00000602716 OPRK1P41145 380 aa13.67□□□□□ -0.22
PPFIA3-207ENST00000602716 ZNF562Q6V9R5 426 aa13.67□□□□□ -0.22
PPFIA3-207ENST00000602716 TMEM183AQ8IXX5 376 aa13.67□□□□□ -0.22
PPFIA3-207ENST00000602716 PFDN5Q99471 154 aa13.67□□□□□ -0.22
PPFIA3-207ENST00000602716 PPP5D1E7EU14 171 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 PDE6DO43924 150 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 GGCTO75223 188 aaKnown RBP13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 RD3LP0DJH9 198 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 TREML4Q6UXN2 200 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 Q6ZS46 218 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 PACRGQ96M98 296 aaPredicted RBP13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 DUX5Q96PT3 197 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 ATP6V0E1O15342 81 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 LY6G6DO95868 133 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 SRP14P37108 136 aaKnown RBP13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 FAM3BP58499 235 aaPredicted RBP13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 MLANAQ16655 118 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 C2orf83Q53S99 150 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 Q6YL49 198 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 SIGLECL1Q8N7X8 197 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 KCNIP2Q9NS61 270 aa13.66□□□□□ -0.22
PPFIA3-207ENST00000602716 HOXA3O43365 443 aaPredicted RBP13.65□□□□□ -0.22
PPFIA3-207ENST00000602716 GATCO43716 136 aaKnown RBP13.65□□□□□ -0.22
PPFIA3-207ENST00000602716 ERHP84090 104 aaKnown RBP13.65□□□□□ -0.22
PPFIA3-207ENST00000602716 COA6Q5JTJ3 125 aaKnown RBP13.65□□□□□ -0.22
PPFIA3-207ENST00000602716 C9orf152Q5JTZ5 239 aa13.65□□□□□ -0.22
PPFIA3-207ENST00000602716 MGST2Q99735 147 aa13.65□□□□□ -0.22
PPFIA3-207ENST00000602716 A0A1W2PPQ1 181 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 A0A1W2PPV4 95 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 TYMSP04818 313 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 ATP5G3P48201 142 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 BLCAPP62952 87 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 ARSJQ5FYB0 599 aaPredicted RBP13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 Q71RC1 249 aaPredicted RBP13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 LINC01551Q86U37 167 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 OR1P1Q8NH06 330 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 GGTLC1Q9BX51 225 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 IGHV3-48P01763 117 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 UBE2G2P60604 165 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 FNDC4Q9H6D8 234 aaPredicted RBP13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 LINC00527Q9UJ94 153 aa13.64□□□□□ -0.23
PPFIA3-207ENST00000602716 F6UZH7 168 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 CD99P14209 185 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 ACTL10Q5JWF8 245 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 CST9LP1Q5W188 147 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 ZNF114Q8NC26 417 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 MRPL36Q9P0J6 103 aaKnown RBP13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 F11RQ9Y624 299 aaKnown RBP13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 CUBNO60494 3623 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 IGHV3-21A0A0B4J1V1 117 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 NDUFB4O95168 129 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 STAG3L2P0CL84 134 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 STAG3L3P0CL85 134 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 GAMTQ14353 236 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 ECSCRQ19T08 205 aa13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 LSM4Q9Y4Z0 139 aaKnown RBP13.63□□□□□ -0.23
PPFIA3-207ENST00000602716 XKRY2A2RUG3 117 aa13.62□□□□□ -0.23
PPFIA3-207ENST00000602716 G3V318 75 aa13.62□□□□□ -0.23
PPFIA3-207ENST00000602716 AMBPP02760 352 aa13.62□□□□□ -0.23
PPFIA3-207ENST00000602716 ARL14EPLP0DKL9 152 aa13.62□□□□□ -0.23
PPFIA3-207ENST00000602716 MIC13Q5XKP0 118 aa13.62□□□□□ -0.23
PPFIA3-207ENST00000602716 RNASEH2CQ8TDP1 164 aaKnown RBP13.62□□□□□ -0.23
PPFIA3-207ENST00000602716 ACY3Q96HD9 319 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms