RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 OR51G1Q8NGK1 321 aa19.09■□□□□ 0.65
PNKP-216ENST00000601816 HOXB5P09067 269 aa19.08■□□□□ 0.64
PNKP-216ENST00000601816 UBE2MP61081 183 aaKnown RBP19.08■□□□□ 0.64
PNKP-216ENST00000601816 RAB11AP62491 216 aa19.08■□□□□ 0.64
PNKP-216ENST00000601816 GAMTQ14353 236 aa19.08■□□□□ 0.64
PNKP-216ENST00000601816 OR11H2Q8NH07 326 aa19.08■□□□□ 0.64
PNKP-216ENST00000601816 NAP1L6A6NFF2 107 aa19.07■□□□□ 0.64
PNKP-216ENST00000601816 BAK1Q16611 211 aa19.07■□□□□ 0.64
PNKP-216ENST00000601816 TRPT1Q86TN4 253 aaKnown RBP19.07■□□□□ 0.64
PNKP-216ENST00000601816 RNF125Q96EQ8 232 aa19.07■□□□□ 0.64
PNKP-216ENST00000601816 PAIP2BQ9ULR5 123 aaKnown RBP19.07■□□□□ 0.64
PNKP-216ENST00000601816 KNCNA6PVL3 124 aa19.06■□□□□ 0.64
PNKP-216ENST00000601816 BUB3O43684 328 aa19.06■□□□□ 0.64
PNKP-216ENST00000601816 CIB3Q96Q77 187 aaPredicted RBP19.06■□□□□ 0.64
PNKP-216ENST00000601816 PBDC1Q9BVG4 233 aa19.06■□□□□ 0.64
PNKP-216ENST00000601816 ALMS1Q8TCU4 4167 aa19.05■□□□□ 0.64
PNKP-216ENST00000601816 PLECQ15149 4684 aaKnown RBP19.05■□□□□ 0.64
PNKP-216ENST00000601816 NDUFB6O95139 128 aa19.05■□□□□ 0.64
PNKP-216ENST00000601816 FABP1P07148 127 aa19.05■□□□□ 0.64
PNKP-216ENST00000601816 NUP62P37198 522 aaPredicted RBP19.05■□□□□ 0.64
PNKP-216ENST00000601816 GGNBP1Q5YKI7 109 aa19.05■□□□□ 0.64
PNKP-216ENST00000601816 CEMP1Q6PRD7 247 aaPredicted RBP19.05■□□□□ 0.64
PNKP-216ENST00000601816 SIGLEC15Q6ZMC9 328 aa19.05■□□□□ 0.64
PNKP-216ENST00000601816 MAGT1Q9H0U3 335 aa19.05■□□□□ 0.64
PNKP-216ENST00000601816 PFDN2Q9UHV9 154 aa19.05■□□□□ 0.64
PNKP-216ENST00000601816 IGKV1D-37A0A075B6S9 117 aa19.04■□□□□ 0.64
PNKP-216ENST00000601816 SYNGR2O43760 224 aa19.04■□□□□ 0.64
PNKP-216ENST00000601816 SPP1P10451 314 aa19.04■□□□□ 0.64
PNKP-216ENST00000601816 RPP30P78346 268 aaKnown RBP19.04■□□□□ 0.64
PNKP-216ENST00000601816 ZNF90Q03938 601 aa19.04■□□□□ 0.64
PNKP-216ENST00000601816 PSMG4Q5JS54 123 aa19.04■□□□□ 0.64
PNKP-216ENST00000601816 ACTL10Q5JWF8 245 aa19.04■□□□□ 0.64
PNKP-216ENST00000601816 OR8G2PQ6IF36 304 aa19.04■□□□□ 0.64
PNKP-216ENST00000601816 MORN3Q6PF18 240 aaPredicted RBP19.04■□□□□ 0.64
PNKP-216ENST00000601816 NRN1Q9NPD7 142 aa19.04■□□□□ 0.64
PNKP-216ENST00000601816 LINC00854A0A1B0GVQ3 168 aa19.03■□□□□ 0.64
PNKP-216ENST00000601816 C9orf170A2RU37 121 aa19.03■□□□□ 0.64
PNKP-216ENST00000601816 WRBO00258 174 aa19.03■□□□□ 0.64
PNKP-216ENST00000601816 TMEM41BQ5BJD5 291 aa19.03■□□□□ 0.64
PNKP-216ENST00000601816 C11orf68Q9H3H3 251 aaKnown RBP19.03■□□□□ 0.64
PNKP-216ENST00000601816 SNRPD3P62318 126 aaKnown RBP19.02■□□□□ 0.64
PNKP-216ENST00000601816 KLK5Q9Y337 293 aaPredicted RBP19.02■□□□□ 0.64
PNKP-216ENST00000601816 CENPXA8MT69 81 aa19.01■□□□□ 0.63
PNKP-216ENST00000601816 LYZP61626 148 aa19.01■□□□□ 0.63
PNKP-216ENST00000601816 COQ8AQ8NI60 647 aa19.01■□□□□ 0.63
PNKP-216ENST00000601816 RAB40CQ96S21 281 aa19.01■□□□□ 0.63
PNKP-216ENST00000601816 TRGV9Q99603 122 aa19.01■□□□□ 0.63
PNKP-216ENST00000601816 SDHCQ99643 169 aaPredicted RBP19.01■□□□□ 0.63
PNKP-216ENST00000601816 SEPSECSQ9HD40 501 aaKnown RBP19.01■□□□□ 0.63
PNKP-216ENST00000601816 FLVCR2Q9UPI3 526 aa19.01■□□□□ 0.63
PNKP-216ENST00000601816 SNRPGP15A8MWD9 76 aa19■□□□□ 0.63
PNKP-216ENST00000601816 ADAP1O75689 374 aa19■□□□□ 0.63
PNKP-216ENST00000601816 GIG44P09565 113 aaPredicted RBP19■□□□□ 0.63
PNKP-216ENST00000601816 OR2F1Q13607 317 aa19■□□□□ 0.63
PNKP-216ENST00000601816 C4BPBP20851 252 aa18.99■□□□□ 0.63
PNKP-216ENST00000601816 SPANXN5Q5MJ07 72 aa18.99■□□□□ 0.63
PNKP-216ENST00000601816 THAP8Q8NA92 274 aa18.99■□□□□ 0.63
PNKP-216ENST00000601816 PHLDA1Q8WV24 401 aaPredicted RBP18.99■□□□□ 0.63
PNKP-216ENST00000601816 LINC00476Q8WZB0 136 aa18.99■□□□□ 0.63
PNKP-216ENST00000601816 C7orf50Q9BRJ6 194 aaKnown RBP18.99■□□□□ 0.63
PNKP-216ENST00000601816 MFFQ9GZY8 342 aa18.99■□□□□ 0.63
PNKP-216ENST00000601816 OR4E1P0C645 316 aa18.98■□□□□ 0.63
PNKP-216ENST00000601816 C11orf45Q8TAV5 145 aa18.98■□□□□ 0.63
PNKP-216ENST00000601816 IGKV1OR2-108A0A075B7D4 117 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 PRSS46E5RG02 174 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 H3BP45 60 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 DEFB4AO15263 64 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 IFNA21P01568 189 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 IL7P13232 177 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 C4orf46Q504U0 113 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 C1orf194Q5T5A4 169 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 PPP1R14BQ96C90 147 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 FBXL17Q9UF56 701 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 STRAPQ9Y3F4 350 aaKnown RBP18.97■□□□□ 0.63
PNKP-216ENST00000601816 AGRNO00468 2067 aa18.97■□□□□ 0.63
PNKP-216ENST00000601816 HYDINQ4G0P3 5121 aa18.96■□□□□ 0.63
PNKP-216ENST00000601816 ANXA7P20073 488 aaKnown RBP18.96■□□□□ 0.63
PNKP-216ENST00000601816 BTCP35070 178 aa18.96■□□□□ 0.63
PNKP-216ENST00000601816 NANOS2P60321 138 aaKnown RBP18.96■□□□□ 0.63
PNKP-216ENST00000601816 ID3Q02535 119 aa18.96■□□□□ 0.63
PNKP-216ENST00000601816 LY6G6CO95867 125 aa18.95■□□□□ 0.62
PNKP-216ENST00000601816 CFDP00746 253 aaPredicted RBP18.95■□□□□ 0.62
PNKP-216ENST00000601816 POLR2GP62487 172 aaKnown RBP eCLIP18.95■□□□□ 0.62
PNKP-216ENST00000601816 Q8NAQ8 132 aa18.95■□□□□ 0.62
PNKP-216ENST00000601816 NDUFA13Q9P0J0 144 aa18.95■□□□□ 0.62
PNKP-216ENST00000601816 NKX2-1P43699 371 aaPredicted RBP18.94■□□□□ 0.62
PNKP-216ENST00000601816 AKR1C1Q04828 323 aa18.94■□□□□ 0.62
PNKP-216ENST00000601816 NUTF2P61970 127 aaKnown RBP18.93■□□□□ 0.62
PNKP-216ENST00000601816 ACOT7LQ6ZUV0 252 aa18.93■□□□□ 0.62
PNKP-216ENST00000601816 OR8I2Q8N0Y5 310 aa18.93■□□□□ 0.62
PNKP-216ENST00000601816 OR4D5Q8NGN0 318 aa18.93■□□□□ 0.62
PNKP-216ENST00000601816 CLEC5AQ9NY25 188 aa18.93■□□□□ 0.62
PNKP-216ENST00000601816 IGHV4-28A0A0C4DH34 117 aa18.92■□□□□ 0.62
PNKP-216ENST00000601816 ZNF705EA8MWA4 302 aaPredicted RBP18.92■□□□□ 0.62
PNKP-216ENST00000601816 H3BMM0 161 aa18.92■□□□□ 0.62
PNKP-216ENST00000601816 SSSCA1O60232 199 aa18.92■□□□□ 0.62
PNKP-216ENST00000601816 MIFP14174 115 aa18.92■□□□□ 0.62
PNKP-216ENST00000601816 ID1P41134 155 aa18.92■□□□□ 0.62
PNKP-216ENST00000601816 CNPY1Q3B7I2 92 aa18.92■□□□□ 0.62
PNKP-216ENST00000601816 LINC00052Q96N35 136 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms