RNA–Protein interactions for RNA: ENST00000601524.5

LINC02028-214, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 616 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-214	ENST00000601524	TMED3	Q9Y3Q3	217 aa		11.96	□□□□□ -0.49
LINC02028-214	ENST00000601524		A0A0B4J293	547 aa		11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	TEX50	A0A1B0GTY4	177 aa		11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	KNCN	A6PVL3	124 aa		11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	ST8SIA3	O43173	380 aa		11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	CTSG	P08311	255 aa		11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	SPART-AS1	P0CW21	52 aa		11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	OR13C7	P0DN81	318 aa		11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	RBPMS	Q93062	196 aa	Known RBP	11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	QTRT1	Q9BXR0	403 aa	Known RBP	11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	RABAC1	Q9UI14	185 aa		11.95	□□□□□ -0.5
LINC02028-214	ENST00000601524	TRAV2	A0A0B4J234	112 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	B3GALNT1	O75752	331 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	AKR1C2	P52895	323 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	FAM3B	P58499	235 aa	Predicted RBP	11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	DEFA1	P59665	94 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	DEFA3	P59666	94 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	C4orf46	Q504U0	113 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	SPINK9	Q5DT21	86 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	ST8SIA2	Q92186	375 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	AIFM2	Q9BRQ8	373 aa		11.94	□□□□□ -0.5
LINC02028-214	ENST00000601524	NBDY	A0A0U1RRE5	68 aa		11.93	□□□□□ -0.5
LINC02028-214	ENST00000601524	ADAP1	O75689	374 aa		11.93	□□□□□ -0.5
LINC02028-214	ENST00000601524	HTN3	P15516	51 aa		11.93	□□□□□ -0.5
LINC02028-214	ENST00000601524	EMP1	P54849	157 aa		11.93	□□□□□ -0.5
LINC02028-214	ENST00000601524	LGI3	Q8N145	548 aa		11.93	□□□□□ -0.5
LINC02028-214	ENST00000601524	LILRB2	Q8N423	598 aa		11.93	□□□□□ -0.5
LINC02028-214	ENST00000601524	C18orf15	Q96N68	181 aa		11.93	□□□□□ -0.5
LINC02028-214	ENST00000601524	OR51B2	Q9Y5P1	312 aa		11.93	□□□□□ -0.5
LINC02028-214	ENST00000601524	IGHV3-66	A0A0C4DH42	116 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524		K7EIM0	57 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	SNAPC5	O75971	98 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	NXPH3	O95157	252 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	HOXB5	P09067	269 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	ANXA3	P12429	323 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	WT1-AS	Q06250	92 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	ACTL10	Q5JWF8	245 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	OR4A16	Q8NH70	328 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	RNASE11	Q8TAA1	199 aa	Known RBP	11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	ATG101	Q9BSB4	218 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	HINT2	Q9BX68	163 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	FAT1	Q14517	4588 aa		11.92	□□□□□ -0.5
LINC02028-214	ENST00000601524	AGRN	O00468	2067 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	INMT-MINDY4	F8WBC2	141 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	APOH	P02749	345 aa	Predicted RBP	11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	TRAPPC2	P0DI81	140 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	TRAPPC2B	P0DI82	140 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	KRTAP10-2	P60368	255 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	NMS	Q5H8A3	153 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	CADM3	Q8N126	398 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	LRTM2	Q8N967	370 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	IL22RA2	Q969J5	263 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	LSM10	Q969L4	123 aa	Known RBP	11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	RRNAD1	Q96FB5	475 aa	Known RBP	11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	GINS3	Q9BRX5	216 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	MARVELD1	Q9BSK0	173 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	VSIR	Q9H7M9	311 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	NDUFA4L2	Q9NRX3	87 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	CACNG5	Q9UF02	275 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	F11R	Q9Y624	299 aa	Known RBP	11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524	MYCBP2	O75592	4640 aa		11.91	□□□□□ -0.5
LINC02028-214	ENST00000601524		A0A0B4J2A0	478 aa		11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	ZNF688	P0C7X2	276 aa		11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	GGNBP1	Q5YKI7	109 aa		11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	THOC7	Q6I9Y2	204 aa	Known RBP	11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	TMEM88	Q6PEY1	159 aa		11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	FAM219A	Q8IW50	185 aa		11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	OR1L8	Q8NGR8	309 aa		11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	ZNF431	Q8TF32	576 aa	Predicted RBP	11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	SHPK	Q9UHJ6	478 aa		11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	PRND	Q9UKY0	176 aa		11.9	□□□□□ -0.5
LINC02028-214	ENST00000601524	NACA	E9PAV3	2078 aa		11.9	□□□□□ -0.51
LINC02028-214	ENST00000601524	CCS	O14618	274 aa		11.89	□□□□□ -0.51
LINC02028-214	ENST00000601524	IL5	P05113	134 aa		11.89	□□□□□ -0.51
LINC02028-214	ENST00000601524		Q5VSD8	79 aa		11.89	□□□□□ -0.51
LINC02028-214	ENST00000601524	MITD1	Q8WV92	249 aa		11.89	□□□□□ -0.51
LINC02028-214	ENST00000601524	NIPSNAP3B	Q9BS92	247 aa		11.89	□□□□□ -0.51
LINC02028-214	ENST00000601524	XCL2	Q9UBD3	114 aa		11.89	□□□□□ -0.51
LINC02028-214	ENST00000601524	TMEM189	A5PLL7	270 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524		K7EQG2	157 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	ATG12	O94817	140 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	PTTG1	O95997	202 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	HSPE1	P61604	102 aa	Known RBP	11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	SRPX	P78539	464 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	STXBP6	Q8NFX7	210 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	FRZB	Q92765	325 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	GRAMD2B	Q96HH9	432 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	C1QTNF4	Q9BXJ3	329 aa		11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.88	□□□□□ -0.51
LINC02028-214	ENST00000601524	SULT1A3	P0DMM9	295 aa		11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	SULT1A4	P0DMN0	295 aa		11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	MFAP4	P55083	255 aa		11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	SMCO1	Q147U7	214 aa		11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	TOMM20L	Q6UXN7	152 aa		11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	ZNRF2	Q8NHG8	242 aa		11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	COQ8A	Q8NI60	647 aa		11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	TMEM231	Q9H6L2	316 aa		11.87	□□□□□ -0.51
LINC02028-214	ENST00000601524	FKBP11	Q9NYL4	201 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms