RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 PQLC2Q6ZP29 291 aa8.6□□□□□ -1.03
LIG1-220ENST00000601091 MDS2Q8NDY4 140 aa8.6□□□□□ -1.03
LIG1-220ENST00000601091 IGLC7A0M8Q6 106 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 ATP5LO75964 103 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 ATP5G3P48201 142 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 RPL8P62917 257 aaKnown RBP8.59□□□□□ -1.03
LIG1-220ENST00000601091 CCL8P80075 99 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 RELBQ01201 579 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 HLA-DRB5Q30154 266 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 OR51G1Q8NGK1 321 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 LINC00477Q96M19 166 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 NPFFR1Q9GZQ6 430 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 DKK4Q9UBT3 224 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 GRIFINA4D1Z8 144 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 REG1AP05451 166 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 FABP2P12104 132 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 CD59P13987 128 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 GCHFRP30047 84 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 C9orf106Q8NAJ2 232 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 OR10AG1Q8NH19 301 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.59□□□□□ -1.03
LIG1-220ENST00000601091 PPIFP30405 207 aaKnown RBP8.59□□□□□ -1.03
LIG1-220ENST00000601091 FOXF2Q12947 444 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 STPG3Q8N7X2 389 aa8.59□□□□□ -1.03
LIG1-220ENST00000601091 CADP27708 2225 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 TMEM8BA6NDV4 472 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 YPEL1O60688 119 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 IGKV1-39P01597 117 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 IGKV1D-39P04432 117 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 DUTP33316 252 aaKnown RBP8.58□□□□□ -1.04
LIG1-220ENST00000601091 YPEL2Q96QA6 119 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 SFXN3Q9BWM7 321 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 SAP30LQ9HAJ7 183 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 IDI2-AS1Q9NZ38 188 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 MRPL27Q9P0M9 148 aaKnown RBP8.58□□□□□ -1.04
LIG1-220ENST00000601091 CLCF1Q9UBD9 225 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 DYSFO75923 2080 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 TMEM89A2RUT3 159 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 ORM2P19652 201 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 FAM162BQ5T6X4 162 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 MRPL54Q6P161 138 aaKnown RBP8.58□□□□□ -1.04
LIG1-220ENST00000601091 FAM90A1Q86YD7 464 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 SCRT1Q9BWW7 348 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 SLC25A10Q9UBX3 287 aaPredicted RBP8.58□□□□□ -1.04
LIG1-220ENST00000601091 LRP4O75096 1905 aa8.58□□□□□ -1.04
LIG1-220ENST00000601091 SLC25A5P05141 298 aaKnown RBP8.57□□□□□ -1.04
LIG1-220ENST00000601091 RND2P52198 227 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 TIMM23BQ5SRD1 257 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 GFRALQ6UXV0 394 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 TMEM170AQ8WVE7 144 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 CA2P00918 260 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 OR9G9P0C7N8 305 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 CAMPP49913 170 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 MOB3BQ86TA1 216 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 KIR2DL5BQ8NHK3 375 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 NABP2Q9BQ15 211 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 FGF23Q9GZV9 251 aaPredicted RBP8.57□□□□□ -1.04
LIG1-220ENST00000601091 CHEK1O14757 476 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 MT-ND6P03923 174 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 ERVK11-1P61568 191 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 HRCT1Q6UXD1 115 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 OR5A1Q8NGJ0 315 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 DUX3Q96PT4 197 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 AGMATQ9BSE5 352 aa8.57□□□□□ -1.04
LIG1-220ENST00000601091 OR4C46A6NHA9 309 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 C16orf97H3BN30 126 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 CRYBB3P26998 211 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 HES1Q14469 280 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 ETDBQ3ZM63 59 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 PEAR1Q5VY43 1037 aaPredicted RBP8.56□□□□□ -1.04
LIG1-220ENST00000601091 C10orf113Q5VZT2 155 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 FAM110DQ8TAY7 271 aaPredicted RBP8.56□□□□□ -1.04
LIG1-220ENST00000601091 COQ2Q96H96 371 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 MRPL18Q9H0U6 180 aaKnown RBP8.56□□□□□ -1.04
LIG1-220ENST00000601091 ADAMTS9Q9P2N4 1935 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 J3KT08 172 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 FAM201AQ5SY85 155 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 PDPNQ86YL7 162 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 OR4C13Q8NGP0 309 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 SCO2A0A1W2PP80 73 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 C9JAW5 83 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 MLNRO43193 412 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 KIR2DL2P43627 348 aaPredicted RBP8.56□□□□□ -1.04
LIG1-220ENST00000601091 SLC35B1P78383 322 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 GAGE2BQ13066 116 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 TCF23Q7RTU1 214 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 SYT8Q8NBV8 401 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 GGTLC1Q9BX51 225 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 HIGD1AQ9Y241 93 aa8.56□□□□□ -1.04
LIG1-220ENST00000601091 A6NDN8 102 aa8.55□□□□□ -1.04
LIG1-220ENST00000601091 FAM90A9PA6NNJ1 464 aa8.55□□□□□ -1.04
LIG1-220ENST00000601091 LINC00473A8K010 186 aa8.55□□□□□ -1.04
LIG1-220ENST00000601091 RRHO14718 337 aa8.55□□□□□ -1.04
LIG1-220ENST00000601091 MT-ATP8P03928 68 aa8.55□□□□□ -1.04
LIG1-220ENST00000601091 C8orf88P0DMB2 117 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 243.7 ms