RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 RAB31Q13636 194 aa8.91□□□□□ -0.98
CHMP2A-207ENST00000600804 KLF5Q13887 457 aaPredicted RBP8.91□□□□□ -0.98
CHMP2A-207ENST00000600804 RPEL1Q2QD12 228 aa8.91□□□□□ -0.98
CHMP2A-207ENST00000600804 ZFP69Q49AA0 526 aa8.91□□□□□ -0.98
CHMP2A-207ENST00000600804 REC114Q7Z4M0 266 aa8.91□□□□□ -0.98
CHMP2A-207ENST00000600804 MRAPQ8TCY5 172 aa8.91□□□□□ -0.98
CHMP2A-207ENST00000600804 FBXL17Q9UF56 701 aa8.91□□□□□ -0.98
CHMP2A-207ENST00000600804 SMCO3A2RU48 225 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 A8MWP6 167 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 ELLP55199 621 aaPredicted RBP8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 CLINT1Q14677 625 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 DEFB136Q30KP8 78 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 TIGITQ495A1 244 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 FAM106AQ4KMX7 169 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 Q8WTZ3 238 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 TMEM190Q8WZ59 177 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 PPP1R14BQ96C90 147 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 WDR61Q9GZS3 305 aaKnown RBP8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 WFDC1Q9HC57 220 aa8.9□□□□□ -0.98
CHMP2A-207ENST00000600804 UBE2L5PA0A1B0GUS4 154 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 K7EMT4 169 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 JTBO76095 146 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 IFNA5P01569 189 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 PSG1P11464 419 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 CXCL2P19875 107 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 RPL29P47914 159 aaKnown RBP8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 PLP1P60201 277 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 PXDC1Q5TGL8 231 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 BTNL8Q6UX41 500 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 CYP2G1PQ6ZSU1 146 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 LINC00482Q8N8I6 264 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 WFDC9Q8NEX5 89 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 OR51G1Q8NGK1 321 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 MGST2Q99735 147 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 ZFAND3Q9H8U3 227 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 KCNIP2Q9NS61 270 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 SIGLEC8Q9NYZ4 499 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 SLC45A2Q9UMX9 530 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 SORL1Q92673 2214 aa8.89□□□□□ -0.99
CHMP2A-207ENST00000600804 WI2-2373I1.2A0A1W2PRP0 233 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 AGPAT2O15120 278 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 PF4P02776 101 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 CAMLGP49069 296 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 EIF2B2P49770 351 aaKnown RBP8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 PRR20EP86478 221 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 PRR20CP86479 221 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 PRR20DP86480 221 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 PRR20BP86481 221 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 PRR20AP86496 221 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 ZNF90Q03938 601 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 OPCMLQ14982 345 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 LGALSLQ3ZCW2 172 aaPredicted RBP8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 TOMM20LQ6UXN7 152 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 BPIFCQ8NFQ6 507 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 ARPC5LQ9BPX5 153 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 GGTLC1Q9BX51 225 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 NPCDR1Q9BY65 106 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 SMIM3Q9BZL3 60 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 ARL6Q9H0F7 186 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 ARV1Q9H2C2 271 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 CYTL1Q9NRR1 136 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 TIMM9Q9Y5J7 89 aa8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 PUS1Q9Y606 427 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHMP2A-207ENST00000600804 DNAH1Q9P2D7 4330 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 STAB2Q8WWQ8 2551 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 BCL2L11O43521 198 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 C4BPBP20851 252 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 FGF7P21781 194 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 SLURP1P55000 103 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 SYNJ2BPP57105 145 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 UNQ9165/PRO28630Q6UXU0 137 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 TMUB2Q71RG4 321 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 C9orf62Q8N4C0 152 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 OR9G4Q8NGQ1 327 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 SCGB1C1Q8TD33 95 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 DLX4Q92988 240 aaPredicted RBP8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 MARC2Q969Z3 335 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 GINS3Q9BRX5 216 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 DAZ1Q9NQZ3 744 aaKnown RBP8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 PEMTQ9UBM1 199 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 UFC1Q9Y3C8 167 aa8.87□□□□□ -0.99
CHMP2A-207ENST00000600804 KANTRA0A1W2PQU2 76 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 C17orf112F2Z3M2 114 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 K7EIL1 84 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 OVOL1O14753 267 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 LINC00869P0C866 280 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 C8orf88P0DMB2 117 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 EIF5AP63241 154 aaKnown RBP8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 RPL7L1Q6DKI1 246 aaKnown RBP8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 LAMTOR1Q6IAA8 161 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 TMEM182Q6ZP80 229 aaPredicted RBP8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 STPG3Q8N7X2 389 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 ZNF709Q8N972 641 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 OR2G3Q8NGZ4 309 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 STOML3Q8TAV4 291 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 GNPNAT1Q96EK6 184 aaPredicted RBP8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 RNF125Q96EQ8 232 aa8.86□□□□□ -0.99
CHMP2A-207ENST00000600804 DUX3Q96PT4 197 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms