RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TNFSF18Q9UNG2 199 aa14.31□□□□□ -0.12
CCDC9-205ENST00000600117 UFC1Q9Y3C8 167 aa14.31□□□□□ -0.12
CCDC9-205ENST00000600117 FXYD6-FXYD2A0A087WZ82 144 aa14.3□□□□□ -0.12
CCDC9-205ENST00000600117 SEC14L6B5MCN3 397 aa14.3□□□□□ -0.12
CCDC9-205ENST00000600117 PSG1P11464 419 aa14.3□□□□□ -0.12
CCDC9-205ENST00000600117 TM4SF20Q53R12 229 aa14.3□□□□□ -0.12
CCDC9-205ENST00000600117 Q8WTZ3 238 aa14.3□□□□□ -0.12
CCDC9-205ENST00000600117 WWC2-AS2Q96NR7 200 aa14.3□□□□□ -0.12
CCDC9-205ENST00000600117 C20orf24Q9BUV8 137 aa14.3□□□□□ -0.12
CCDC9-205ENST00000600117 WDR83OSQ9Y284 106 aa14.3□□□□□ -0.12
CCDC9-205ENST00000600117 EPPK1P58107 5090 aaKnown RBP14.29□□□□□ -0.12
CCDC9-205ENST00000600117 RYR2Q92736 4967 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 RNF222A6NCQ9 220 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 K7EMT4 169 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 YIF1AO95070 293 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 RD3LP0DJH9 198 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 CLINT1Q14677 625 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 TEPPQ6URK8 271 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 TMEM182Q6ZP80 229 aaPredicted RBP14.29□□□□□ -0.12
CCDC9-205ENST00000600117 ZNF546Q86UE3 836 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 TCTE3Q8IZS6 198 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 ELOVL1Q9BW60 279 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 DAZ1Q9NQZ3 744 aaKnown RBP14.29□□□□□ -0.12
CCDC9-205ENST00000600117 SIGLEC8Q9NYZ4 499 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 BIRC6Q9NR09 4857 aa14.29□□□□□ -0.12
CCDC9-205ENST00000600117 UBE2L5PA0A1B0GUS4 154 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 WI2-2373I1.2A0A1W2PRP0 233 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 ZNF207O43670 478 aaKnown RBP14.28□□□□□ -0.12
CCDC9-205ENST00000600117 C8orf88P0DMB2 117 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 OR2F1Q13607 317 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 C9orf66Q5T8R8 295 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 CYP2G1PQ6ZSU1 146 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 OR11H4Q8NGC9 324 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 MGST2Q99735 147 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 SACSQ9NZJ4 4579 aa14.28□□□□□ -0.12
CCDC9-205ENST00000600117 STAB2Q8WWQ8 2551 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 SAP30O75446 220 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 FABP1P07148 127 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 FOLR2P14207 255 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 CBLN1P23435 193 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 GATA2P23769 480 aaPredicted RBP14.27□□□□□ -0.13
CCDC9-205ENST00000600117 USF2Q15853 346 aaPredicted RBP14.27□□□□□ -0.13
CCDC9-205ENST00000600117 BTNL8Q6UX41 500 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 OR51G1Q8NGK1 321 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 ATP5SQ99766 215 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 SMIM3Q9BZL3 60 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 WFDC1Q9HC57 220 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 SLC45A2Q9UMX9 530 aa14.27□□□□□ -0.13
CCDC9-205ENST00000600117 DNAH7Q8WXX0 4024 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 K7EIL1 84 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 AGPAT2O15120 278 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 IL4P05112 153 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 NUP62P37198 522 aaPredicted RBP14.26□□□□□ -0.13
CCDC9-205ENST00000600117 INSL3P51460 131 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 AKAP14Q86UN6 197 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 INO80EQ8NBZ0 244 aaPredicted RBP14.26□□□□□ -0.13
CCDC9-205ENST00000600117 MARC2Q969Z3 335 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 GINS3Q9BRX5 216 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 MRPL27Q9P0M9 148 aaKnown RBP14.26□□□□□ -0.13
CCDC9-205ENST00000600117 FBXL17Q9UF56 701 aa14.26□□□□□ -0.13
CCDC9-205ENST00000600117 IGHV7-4-1A0A0J9YVY3 117 aa14.25□□□□□ -0.13
CCDC9-205ENST00000600117 FGF7P21781 194 aa14.25□□□□□ -0.13
CCDC9-205ENST00000600117 SELENOTP62341 195 aa14.25□□□□□ -0.13
CCDC9-205ENST00000600117 CD300CQ08708 224 aa14.25□□□□□ -0.13
CCDC9-205ENST00000600117 RNF125Q96EQ8 232 aa14.25□□□□□ -0.13
CCDC9-205ENST00000600117 GGTLC1Q9BX51 225 aa14.25□□□□□ -0.13
CCDC9-205ENST00000600117 SMPXQ9UHP9 88 aa14.25□□□□□ -0.13
CCDC9-205ENST00000600117 HMSDA8MTL9 139 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 ARPC5O15511 151 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 DFFBO76075 338 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 CFDP00746 253 aaPredicted RBP14.24□□□□□ -0.13
CCDC9-205ENST00000600117 IGLV1-51P01701 117 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 CRYBB3P26998 211 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 CAMLGP49069 296 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 BPIFCQ8NFQ6 507 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 GPR61Q9BZJ8 451 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 WDR61Q9GZS3 305 aaKnown RBP14.24□□□□□ -0.13
CCDC9-205ENST00000600117 MLXQ9UH92 298 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 U3KQE9 123 aa14.24□□□□□ -0.13
CCDC9-205ENST00000600117 IGHV3-49A0A0A0MS15 119 aa14.23□□□□□ -0.13
CCDC9-205ENST00000600117 APOHP02749 345 aaPredicted RBP14.23□□□□□ -0.13
CCDC9-205ENST00000600117 NPPCP23582 126 aa14.23□□□□□ -0.13
CCDC9-205ENST00000600117 LYZP61626 148 aa14.23□□□□□ -0.13
CCDC9-205ENST00000600117 OPCMLQ14982 345 aa14.23□□□□□ -0.13
CCDC9-205ENST00000600117 STPG3Q8N7X2 389 aa14.23□□□□□ -0.13
CCDC9-205ENST00000600117 METTL26Q96S19 204 aa14.23□□□□□ -0.13
CCDC9-205ENST00000600117 MFFQ9GZY8 342 aa14.23□□□□□ -0.13
CCDC9-205ENST00000600117 CHEK1O14757 476 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 MPDU1O75352 247 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 HNRNPCP07910 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC9-205ENST00000600117 LINC00869P0C866 280 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 AP2S1P53680 142 aaPredicted RBP14.22□□□□□ -0.13
CCDC9-205ENST00000600117 PLP1P60201 277 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 PRR20EP86478 221 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 PRR20CP86479 221 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 PRR20DP86480 221 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 PRR20BP86481 221 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 PRR20AP86496 221 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 RAB31Q13636 194 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 DEFB114Q30KQ6 69 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms