RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 WFDC8Q8IUA0 241 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 ATOH7Q8N100 152 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 RPRMLQ8N4K4 120 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 MDS2Q8NDY4 140 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 NUP35Q8NFH5 326 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 C8orf46Q8TAG6 207 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 SRSF12Q8WXF0 261 aaKnown RBP2.9□□□□□ -1.94
VMP1-216ENST00000592790 DPF1Q92782 380 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 CCL13Q99616 98 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 Q9H3A6 140 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 HIF1ANQ9NWT6 349 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 CLEC5AQ9NY25 188 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 RABAC1Q9UI14 185 aa2.9□□□□□ -1.94
VMP1-216ENST00000592790 PINLYPA6NC86 204 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 ZNF785A8K8V0 405 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 HBDP02042 147 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 APOHP02749 345 aaPredicted RBP2.9□□□□□ -1.95
VMP1-216ENST00000592790 MFAP4P55083 255 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 HS3ST6Q96QI5 342 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 SLC25A2Q9BXI2 301 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 NXT2Q9NPJ8 142 aaKnown RBP2.9□□□□□ -1.95
VMP1-216ENST00000592790 HIVEP3Q5T1R4 2406 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 C7orf71A4D174 169 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 INS-IGF2F8WCM5 200 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 C16orf97H3BN30 126 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 SIVA1O15304 175 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 IGHV3-7P01780 117 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 IGHG3P01860 377 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 RNASE2P10153 161 aaKnown RBP2.9□□□□□ -1.95
VMP1-216ENST00000592790 CDKN1AP38936 164 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 GATA4P43694 442 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 ZNF329Q86UD4 541 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 ODF3L1Q8IXM7 274 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 MUC15Q8N387 334 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 ZNRF1Q8ND25 227 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 MAFAQ8NHW3 353 aaPredicted RBP2.9□□□□□ -1.95
VMP1-216ENST00000592790 RND1Q92730 232 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 PRELID3AQ96N28 172 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 CLEC7AQ9BXN2 247 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 HES7Q9BYE0 225 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 PTPRSQ13332 1948 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 POLEQ07864 2286 aa2.9□□□□□ -1.95
VMP1-216ENST00000592790 C9orf172C9J069 976 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 C22orf46C9J442 243 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 C15orf65H3BRN8 121 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SP9P0CG40 484 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 FCER1GP30273 86 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 TFPI2P48307 235 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 Q0VFX4 171 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 DEFB109BQ30KR1 87 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SPATA31B1PQ5VZV4 182 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 CD177Q8N6Q3 437 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 FAM222BQ8WU58 562 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 KMT2EQ8IZD2 1858 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 GPR179Q6PRD1 2367 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 ATG2AQ2TAZ0 1938 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 FAM186AA6NE01 2351 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 CELSR3Q9NYQ7 3312 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 LOC102724200A0A096LPH7 203 aaPredicted RBP2.89□□□□□ -1.95
VMP1-216ENST00000592790 LY6G6EA0A0G2JKS1 128 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 TCRAP04437 139 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 CELA3BP08861 270 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 NPSP0C0P6 89 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SMIM17P0DL12 118 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SCGB1A1P11684 91 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SPINK2P20155 84 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 NMUP48645 174 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 GOLT1AQ6ZVE7 132 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 ZCCHC24Q8N2G6 241 aaKnown RBP2.89□□□□□ -1.95
VMP1-216ENST00000592790 C8orf31Q8N9H6 132 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 Q8TCH9 128 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 WFDC12Q8WWY7 111 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 CCL17Q92583 94 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SLC25A39Q9BZJ4 359 aaPredicted RBP2.89□□□□□ -1.95
VMP1-216ENST00000592790 FSCN3Q9NQT6 498 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 U3KQA8 63 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 IGHV1-18A0A0C4DH31 117 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 TMEM238C9JI98 176 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 F2Z2F3 143 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 FOXH1O75593 365 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 IGLV2-14P01704 120 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 FOXA3P55318 350 aaPredicted RBP2.89□□□□□ -1.95
VMP1-216ENST00000592790 PDE6HQ13956 83 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 CR1LQ2VPA4 569 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SP5Q6BEB4 398 aaPredicted RBP2.89□□□□□ -1.95
VMP1-216ENST00000592790 THAP8Q8NA92 274 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 ZNF114Q8NC26 417 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 OR2K2Q8NGT1 345 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 MRPL20Q9BYC9 149 aaKnown RBP2.89□□□□□ -1.95
VMP1-216ENST00000592790 TMEM14CQ9P0S9 112 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 IGHV2-70DA0A0C4DH43 119 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 IGLC7A0M8Q6 106 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 PATE3B3GLJ2 98 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 H3BRM9 83 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 IGHG4P01861 327 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 FOXG1P55316 489 aaPredicted RBP2.89□□□□□ -1.95
VMP1-216ENST00000592790 TRIP6Q15654 476 aaKnown RBP2.89□□□□□ -1.95
VMP1-216ENST00000592790 Q5PR19 223 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 LDLRAD2Q5SZI1 272 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 UNQ5815/PRO19632Q6UWF5 114 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms