RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 LGALSLQ3ZCW2 172 aaPredicted RBP11.61□□□□□ -0.55
ATG4D-211ENST00000589753 TOMM20LQ6UXN7 152 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 UNQ9165/PRO28630Q6UXU0 137 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 TMUB2Q71RG4 321 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 REC114Q7Z4M0 266 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 LINC00482Q8N8I6 264 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 BPIFCQ8NFQ6 507 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 OR51G1Q8NGK1 321 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 RCC1LQ96I51 464 aaKnown RBP11.61□□□□□ -0.55
ATG4D-211ENST00000589753 NPCDR1Q9BY65 106 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 IGHV3OR16-8A0A075B7F1 116 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 OVOL1O14753 267 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 BCL2L11O43521 198 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 CFDP00746 253 aaPredicted RBP11.6□□□□□ -0.55
ATG4D-211ENST00000589753 IL4P05112 153 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
ATG4D-211ENST00000589753 OPCMLQ14982 345 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 RPL7L1Q6DKI1 246 aaKnown RBP11.6□□□□□ -0.55
ATG4D-211ENST00000589753 TMEM182Q6ZP80 229 aaPredicted RBP11.6□□□□□ -0.55
ATG4D-211ENST00000589753 C20orf24Q9BUV8 137 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 GGTLC1Q9BX51 225 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 SLC45A2Q9UMX9 530 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 UFC1Q9Y3C8 167 aa11.6□□□□□ -0.55
ATG4D-211ENST00000589753 A8MWP6 167 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 C17orf112F2Z3M2 114 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 JTBO76095 146 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 RPL29P47914 159 aaKnown RBP11.59□□□□□ -0.55
ATG4D-211ENST00000589753 C9orf62Q8N4C0 152 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 ZNF709Q8N972 641 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 OR9G4Q8NGQ1 327 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 RNF125Q96EQ8 232 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 GINS3Q9BRX5 216 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 CYTL1Q9NRR1 136 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 PEMTQ9UBM1 199 aa11.59□□□□□ -0.55
ATG4D-211ENST00000589753 WI2-2373I1.2A0A1W2PRP0 233 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 K7EMT4 169 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 LINC00869P0C866 280 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 NKX2-5P52952 324 aaPredicted RBP11.58□□□□□ -0.56
ATG4D-211ENST00000589753 ELLP55199 621 aaPredicted RBP11.58□□□□□ -0.56
ATG4D-211ENST00000589753 LYZP61626 148 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 PRR20EP86478 221 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 PRR20CP86479 221 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 PRR20DP86480 221 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 PRR20BP86481 221 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 PRR20AP86496 221 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 MIC13Q5XKP0 118 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 STPG3Q8N7X2 389 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 HSD17B11Q8NBQ5 300 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 RSG1Q9BU20 258 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 PBDC1Q9BVG4 233 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
ATG4D-211ENST00000589753 KCNIP2Q9NS61 270 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
ATG4D-211ENST00000589753 ZNF207O43670 478 aaKnown RBP11.57□□□□□ -0.56
ATG4D-211ENST00000589753 CD33P20138 364 aa11.57□□□□□ -0.56
ATG4D-211ENST00000589753 B2MP61769 119 aa11.57□□□□□ -0.56
ATG4D-211ENST00000589753 USF2Q15853 346 aaPredicted RBP11.57□□□□□ -0.56
ATG4D-211ENST00000589753 LAMTOR1Q6IAA8 161 aa11.57□□□□□ -0.56
ATG4D-211ENST00000589753 ELOVL1Q9BW60 279 aa11.57□□□□□ -0.56
ATG4D-211ENST00000589753 ZNF471Q9BX82 626 aaPredicted RBP11.57□□□□□ -0.56
ATG4D-211ENST00000589753 SLC39A9Q9NUM3 307 aa11.57□□□□□ -0.56
ATG4D-211ENST00000589753 TMEM213A2RRL7 107 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 BOLA2-SMG1P6H3BVE0 249 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 ORM2P19652 201 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 C4BPBP20851 252 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 NPPCP23582 126 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 PLP1P60201 277 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 PXDC1Q5TGL8 231 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 Q6ZRG5 221 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 WFDC9Q8NEX5 89 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 OR1B1Q8NGR6 318 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 METTL26Q96S19 204 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 RABAC1Q9UI14 185 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 TIMM9Q9Y5J7 89 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 STAB1Q9NY15 2570 aa11.56□□□□□ -0.56
ATG4D-211ENST00000589753 DNHD1Q96M86 4753 aa11.55□□□□□ -0.56
ATG4D-211ENST00000589753 C2orf70A6NJV1 201 aa11.55□□□□□ -0.56
ATG4D-211ENST00000589753 HYPMO75409 117 aa11.55□□□□□ -0.56
ATG4D-211ENST00000589753 CSN3P07498 182 aa11.55□□□□□ -0.56
ATG4D-211ENST00000589753 HNRNPCP07910 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
ATG4D-211ENST00000589753 ATP6V0CP27449 155 aa11.55□□□□□ -0.56
ATG4D-211ENST00000589753 EIF5AP63241 154 aaKnown RBP11.55□□□□□ -0.56
ATG4D-211ENST00000589753 IL34Q6ZMJ4 242 aa11.55□□□□□ -0.56
ATG4D-211ENST00000589753 GNPNAT1Q96EK6 184 aaPredicted RBP11.55□□□□□ -0.56
ATG4D-211ENST00000589753 PSMG3Q9BT73 122 aaPredicted RBP11.55□□□□□ -0.56
ATG4D-211ENST00000589753 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
ATG4D-211ENST00000589753 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
ATG4D-211ENST00000589753 DOK5Q9P104 306 aa11.55□□□□□ -0.56
ATG4D-211ENST00000589753 IGHV7-4-1A0A0J9YVY3 117 aa11.54□□□□□ -0.56
ATG4D-211ENST00000589753 COX7A2P2O60397 106 aa11.54□□□□□ -0.56
ATG4D-211ENST00000589753 OR5G3P0C626 314 aa11.54□□□□□ -0.56
ATG4D-211ENST00000589753 FOLR2P14207 255 aa11.54□□□□□ -0.56
ATG4D-211ENST00000589753 EDN2P20800 178 aa11.54□□□□□ -0.56
ATG4D-211ENST00000589753 CBLN1P23435 193 aa11.54□□□□□ -0.56
ATG4D-211ENST00000589753 CRYBB3P26998 211 aa11.54□□□□□ -0.56
ATG4D-211ENST00000589753 PRR31Q5SQ13 230 aa11.54□□□□□ -0.56
ATG4D-211ENST00000589753 MARC2Q969Z3 335 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms