RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 AGPAT2O15120 278 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 SAP30O75446 220 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 APOHP02749 345 aaPredicted RBP8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 FOLR2P14207 255 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 CBLN1P23435 193 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 AP2S1P53680 142 aaPredicted RBP8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 ELLP55199 621 aaPredicted RBP8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 USF2Q15853 346 aaPredicted RBP8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 C9orf66Q5T8R8 295 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 CYP2G1PQ6ZSU1 146 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 TCTE3Q8IZS6 198 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 OR51G1Q8NGK1 321 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 MCRIP2Q9BUT9 160 aaKnown RBP8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 ELOVL1Q9BW60 279 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 DAZ1Q9NQZ3 744 aaKnown RBP8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 WDR83OSQ9Y284 106 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
SMARCA4-213ENST00000587988 IGHV3OR16-13A0A075B7E8 117 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 IGHV3-74A0A0B4J1X5 117 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 ARPC5O15511 151 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 IL4P05112 153 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 C8orf88P0DMB2 117 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 FGF7P21781 194 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 NUP62P37198 522 aaPredicted RBP8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 LYZP61626 148 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 BTNL8Q6UX41 500 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 AKAP14Q86UN6 197 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 INO80EQ8NBZ0 244 aaPredicted RBP8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 BPIFCQ8NFQ6 507 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 RNF125Q96EQ8 232 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 ATP5SQ99766 215 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 SIGLEC8Q9NYZ4 499 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 FBXL17Q9UF56 701 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 SLC45A2Q9UMX9 530 aa8.11□□□□□ -1.11
SMARCA4-213ENST00000587988 IGHV3-66A0A0C4DH42 116 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 IGHV7-4-1A0A0J9YVY3 117 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 CHEK1O14757 476 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 FABP1P07148 127 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 LINC00869P0C866 280 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 CRYBB3P26998 211 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 CAMLGP49069 296 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 OPCMLQ14982 345 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 MIC13Q5XKP0 118 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 STPG3Q8N7X2 389 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 GINS3Q9BRX5 216 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 PBDC1Q9BVG4 233 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 GGTLC1Q9BX51 225 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 MFFQ9GZY8 342 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 MRPL27Q9P0M9 148 aaKnown RBP8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 MLXQ9UH92 298 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 SMPXQ9UHP9 88 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 NOTCH3Q9UM47 2321 aa8.1□□□□□ -1.11
SMARCA4-213ENST00000587988 IZUMO1RA6ND01 250 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 HMSDA8MTL9 139 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 WIPF1O43516 503 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 DFFBO76075 338 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 IGLV1-51P01701 117 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 CXCL2P19875 107 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 NPPCP23582 126 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 INSL3P51460 131 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 DEFB114Q30KQ6 69 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 ST8SIA2Q92186 375 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 METTL26Q96S19 204 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 NEURL2Q9BR09 285 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 RHPN1-AS1Q9BWJ2 59 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 NPCDR1Q9BY65 106 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 DOK5Q9P104 306 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 RFNGQ9Y644 331 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 U3KQE9 123 aa8.09□□□□□ -1.11
SMARCA4-213ENST00000587988 CFDP00746 253 aaPredicted RBP8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 IFNA5P01569 189 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 C1QBP02746 253 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 HNRNPCP07910 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 ORM2P19652 201 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 EIF2B2P49770 351 aaKnown RBP8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 PLP1P60201 277 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 KRTAP10-11P60412 298 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 SELENOTP62341 195 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 PRR20EP86478 221 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 PRR20CP86479 221 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 PRR20DP86480 221 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 PRR20BP86481 221 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 PRR20AP86496 221 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 RAB31Q13636 194 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 CD300EQ496F6 205 aaPredicted RBP8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 PATE2Q6UY27 113 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 OR1B1Q8NGR6 318 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 DYNLRB2Q8TF09 96 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 MARC2Q969Z3 335 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 RNF2Q99496 336 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 RSG1Q9BU20 258 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 VSIRQ9H7M9 311 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 RABAC1Q9UI14 185 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 PXMP4Q9Y6I8 212 aa8.08□□□□□ -1.12
SMARCA4-213ENST00000587988 MPDU1O75352 247 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 RPL29P47914 159 aaKnown RBP8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 B2MP61769 119 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 ZNF345Q14585 488 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms