RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 DEFA4P12838 97 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 HLA-DMBP28068 263 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 GPR183P32249 361 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 DUTP33316 252 aaKnown RBP5.54□□□□□ -1.52
CCDC47-205ENST00000582331 RPL27AP46776 148 aaKnown RBP5.54□□□□□ -1.52
CCDC47-205ENST00000582331 KLK9Q2XQG4 91 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 ALKAL2Q6UX46 152 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 ZNF818PQ6ZRF7 136 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 LYZL2Q7Z4W2 148 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 SELENOHQ8IZQ5 122 aaKnown RBP5.54□□□□□ -1.52
CCDC47-205ENST00000582331 OR10J5Q8NHC4 309 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 TMEM56Q96MV1 263 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 AQP10Q96PS8 301 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 TP53RKQ96S44 253 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 TMEM222Q9H0R3 208 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 MED9Q9NWA0 146 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 GSKIPQ9P0R6 139 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 KLK9Q9UKQ9 250 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 OR2W1Q9Y3N9 320 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 TMEM56-RWDD3S4R434 201 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 IGLV11-55A0A075B6I3 123 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 KANTRA0A1W2PQU2 76 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 MFSD2BA6NFX1 497 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 LINC00473A8K010 186 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 E7EUB6 86 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 FCGR3BO75015 233 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 PGLYRP1O75594 196 aaPredicted RBP5.53□□□□□ -1.52
CCDC47-205ENST00000582331 CA1P00915 261 aaPredicted RBP5.53□□□□□ -1.52
CCDC47-205ENST00000582331 MBPP02686 304 aaPredicted RBP5.53□□□□□ -1.52
CCDC47-205ENST00000582331 RLN2P04090 185 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 AREGP15514 252 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 UCP1P25874 307 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 MAS1LP35410 378 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 RAB14P61106 215 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 SOHLH1Q5JUK2 328 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 Q6ZTC4 211 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 TBC1D26Q86UD7 250 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 COMMD7Q86VX2 200 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 FAM219AQ8IW50 185 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 INO80EQ8NBZ0 244 aaPredicted RBP5.53□□□□□ -1.52
CCDC47-205ENST00000582331 OR4D5Q8NGN0 318 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 STOML3Q8TAV4 291 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 ZNF502Q8TBZ5 544 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 SECTM1Q8WVN6 248 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 TMEM190Q8WZ59 177 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 ARPC5LQ9BPX5 153 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 C11orf1Q9H5F2 150 aa5.53□□□□□ -1.52
CCDC47-205ENST00000582331 DAZ1Q9NQZ3 744 aaKnown RBP5.53□□□□□ -1.52
CCDC47-205ENST00000582331 A0A1B0GW64 132 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 C16orf90A8MZG2 172 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 K7EMT4 169 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 K7EPK0 472 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 TGOLN2O43493 480 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 CDS2O95674 445 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 IFNA10P01566 189 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 IGLV2-14P01704 120 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 REG1AP05451 166 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 RBMY1A1P0DJD3 496 aaKnown RBP5.52□□□□□ -1.53
CCDC47-205ENST00000582331 RBMY1CP0DJD4 496 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 S100A10P60903 97 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 SRPXP78539 464 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 RBMY1FQ15415 496 aaKnown RBP5.52□□□□□ -1.53
CCDC47-205ENST00000582331 TMEM268Q5VZI3 342 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 SSX9Q7RTT3 188 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 VKORC1L1Q8N0U8 176 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 SLC35G3Q8N808 338 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 Q8NAQ8 132 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 DMBX1Q8NFW5 382 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 VSTM2AQ8TAG5 236 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 IL22RA2Q969J5 263 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 PHYHIPLQ96FC7 376 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 GPHA2Q96T91 129 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 C20orf24Q9BUV8 137 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 ZNF471Q9BX82 626 aaPredicted RBP5.52□□□□□ -1.53
CCDC47-205ENST00000582331 SLC25A32Q9H2D1 315 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 TMED3Q9Y3Q3 217 aa5.52□□□□□ -1.53
CCDC47-205ENST00000582331 IGLV2-18A0A075B6J9 118 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 DEFB131BA0A096LNP1 70 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 IGHV4-28A0A0C4DH34 117 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 DUXBA0A1W2PPF3 345 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 ZNF207O43670 478 aaKnown RBP5.51□□□□□ -1.53
CCDC47-205ENST00000582331 KBTBD11O94819 623 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 AMBPP02760 352 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 PET100P0DJ07 73 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 F2RP25116 425 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 RPL12P30050 165 aaKnown RBP5.51□□□□□ -1.53
CCDC47-205ENST00000582331 NUP62P37198 522 aaPredicted RBP5.51□□□□□ -1.53
CCDC47-205ENST00000582331 TFPI2P48307 235 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 NMSQ5H8A3 153 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 OR2B11Q5JQS5 317 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 FAM74A1Q5RGS3 127 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 Q6ZR54 194 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 Q8N1X5 172 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 TMEM167AQ8TBQ9 72 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 RNF141Q8WVD5 230 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 BSCL2Q96G97 398 aaPredicted RBP5.51□□□□□ -1.53
CCDC47-205ENST00000582331 CHRDL1Q9BU40 450 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 NDUFAF3Q9BU61 184 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 SCRT2Q9NQ03 307 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms