RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 DNASE2O00115 360 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-218ENST00000580391 SMAD7O15105 426 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-218ENST00000580391 TAS2R45P59539 299 aa11.61□□□□□ -0.55
CDK5RAP3-218ENST00000580391 LYZP61626 148 aa11.61□□□□□ -0.55
CDK5RAP3-218ENST00000580391 LINC00305Q7Z4B0 112 aa11.61□□□□□ -0.55
CDK5RAP3-218ENST00000580391 OR5AU1Q8NGC0 362 aa11.61□□□□□ -0.55
CDK5RAP3-218ENST00000580391 C21orf62Q9NYP8 219 aa11.61□□□□□ -0.55
CDK5RAP3-218ENST00000580391 THYN1Q9P016 225 aa11.61□□□□□ -0.55
CDK5RAP3-218ENST00000580391 H3BQ15 152 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 M0R036 132 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 NUPL2O15504 423 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 GNG7O60262 68 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 OR10J4P0C629 311 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 AKR1C3P42330 323 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 CRIP2P52943 208 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 MFAP4P55083 255 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 Q56UQ5 140 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 C19orf54Q5BKX5 351 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 TMEM88Q6PEY1 159 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 PQLC2Q6ZP29 291 aa11.6□□□□□ -0.55
CDK5RAP3-218ENST00000580391 TRAV41A0A0B4J266 112 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 PLP1P60201 277 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 BLCAPP62952 87 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 RHOGP84095 191 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 Q6ZS46 218 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 CBLN2Q8IUK8 224 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 ZNF48Q96MX3 618 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 ELOA3CA0A087WX78 387 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 TMEM250H0YL14 139 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 M0QZK8 103 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 HYPMO75409 117 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 RD3LP0DJH9 198 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 PYYP10082 97 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 HIST1H1BP16401 226 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 KLK9Q2XQG4 91 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 C9orf139Q6ZV77 190 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 C16orf82Q7Z2V1 217 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 RPUSD4Q96CM3 377 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 TMEM68Q96MH6 324 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 TMEM167BQ9NRX6 74 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 KLK9Q9UKQ9 250 aa11.59□□□□□ -0.55
CDK5RAP3-218ENST00000580391 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 OR2T8A6NH00 312 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 TOMM40O96008 361 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 IGHG2P01859 326 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 NPPCP23582 126 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 IER3P46695 156 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 UBE2L3P68036 154 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ZNF674Q2M3X9 581 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 C15orf32Q32M92 178 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 MS4A10Q96PG2 267 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 NIPSNAP3BQ9BS92 247 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 PARLQ9H300 379 aa11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 NOL4LQ96MY1 436 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-218ENST00000580391 SONP18583 2426 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 C7orf77A4D0Y5 90 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ZNF727A8MUV8 499 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 IGF1P05019 195 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 FABP1P07148 127 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 LEMD1Q68G75 181 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 IL17RELQ6ZVW7 336 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 VN1R17PQ8TDU5 208 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 FOXC2Q99958 501 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 SMIM7Q9BQ49 75 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 PAXXQ9BUH6 204 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 HIGD1AQ9Y241 93 aa11.57□□□□□ -0.56
CDK5RAP3-218ENST00000580391 TRAV30A0A087WSZ9 112 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 PDE6DO43924 150 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 NDUFS6O75380 124 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 IL4P05112 153 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ZNF502Q8TBZ5 544 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 SUN5Q8TC36 379 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 RNF125Q96EQ8 232 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 TVP23CQ96ET8 276 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 DERL1Q9BUN8 251 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 TMA7Q9Y2S6 64 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 SNRPCP09234 159 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 FCGR2BP31994 310 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 GPR183P32249 361 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ZNF491Q8N8L2 437 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 NECAP1Q8NC96 275 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 CCDC140Q96MF4 163 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 CHRDL1Q9BU40 450 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 OR51M1Q9H341 326 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ARL2-SNX15V9GYD0 113 aa11.56□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ACANP16112 2415 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 GGTLC3B5MD39 225 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 F6UZH7 168 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ADMP35318 185 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 RHEBQ15382 184 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 USF2Q15853 346 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 TMEM95Q3KNT9 176 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 Q6YL49 198 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 OR5R1Q8NH85 324 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 FXYD5Q96DB9 178 aa11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 TXNDC17Q9BRA2 123 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms