RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 LGALS9O00182 355 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 GATA2P23769 480 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 CAMLGP49069 296 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 SELENOTP62341 195 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 RAB31Q13636 194 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 TMUB2Q71RG4 321 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 TMEM190Q8WZ59 177 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 RCC1LQ96I51 464 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 ARPC5LQ9BPX5 153 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 GGTLC1Q9BX51 225 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 NPCDR1Q9BY65 106 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 CYTL1Q9NRR1 136 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 SLC45A2Q9UMX9 530 aa12.15□□□□□ -0.46
CSNK1D-212ENST00000580061 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
CSNK1D-212ENST00000580061 YIF1AO95070 293 aa12.14□□□□□ -0.47
CSNK1D-212ENST00000580061 OPCMLQ14982 345 aa12.14□□□□□ -0.47
CSNK1D-212ENST00000580061 RPL7L1Q6DKI1 246 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-212ENST00000580061 C9orf62Q8N4C0 152 aa12.14□□□□□ -0.47
CSNK1D-212ENST00000580061 SCGB1C1Q8TD33 95 aa12.14□□□□□ -0.47
CSNK1D-212ENST00000580061 VWFP04275 2813 aa12.14□□□□□ -0.47
CSNK1D-212ENST00000580061 CMYA5Q8N3K9 4069 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 IGHV3OR16-8A0A075B7F1 116 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 KANTRA0A1W2PQU2 76 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 WI2-2373I1.2A0A1W2PRP0 233 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 A8MWP6 167 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 OVOL1O14753 267 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 BCL2L11O43521 198 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 CFDP00746 253 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 IL4P05112 153 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 LAMTOR1Q6IAA8 161 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 BPIFCQ8NFQ6 507 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 OR9G4Q8NGQ1 327 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 C20orf24Q9BUV8 137 aa12.13□□□□□ -0.47
CSNK1D-212ENST00000580061 BORCS7-ASMTA0A0B4J1R7 106 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 K7EMT4 169 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 JTBO76095 146 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 LINC00869P0C866 280 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 RPL29P47914 159 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 NKX2-5P52952 324 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 ELLP55199 621 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 PRR20EP86478 221 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 PRR20CP86479 221 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 PRR20DP86480 221 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 PRR20BP86481 221 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 PRR20AP86496 221 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 USF2Q15853 346 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 MIC13Q5XKP0 118 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 RNF125Q96EQ8 232 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 GINS3Q9BRX5 216 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 PEMTQ9UBM1 199 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 UFC1Q9Y3C8 167 aa12.12□□□□□ -0.47
CSNK1D-212ENST00000580061 TMEM213A2RRL7 107 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 PLP1P60201 277 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 LYZP61626 148 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 TM4SF20Q53R12 229 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 STPG3Q8N7X2 389 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 ZNF709Q8N972 641 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 HSD17B11Q8NBQ5 300 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 WFDC9Q8NEX5 89 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 DAZ1Q9NQZ3 744 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 PXMP4Q9Y6I8 212 aa12.11□□□□□ -0.47
CSNK1D-212ENST00000580061 BOLA2-SMG1P6H3BVE0 249 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 ZNF207O43670 478 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 EDN2P20800 178 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 ATP6V0CP27449 155 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 B2MP61769 119 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 IL34Q6ZMJ4 242 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 PBDC1Q9BVG4 233 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 ZNF471Q9BX82 626 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 ARV1Q9H2C2 271 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 KCNIP2Q9NS61 270 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 TIMM9Q9Y5J7 89 aa12.1□□□□□ -0.47
CSNK1D-212ENST00000580061 C2orf70A6NJV1 201 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 CSN3P07498 182 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 ORM2P19652 201 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 CD33P20138 364 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 Q6ZRG5 221 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 OR1B1Q8NGR6 318 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 METTL26Q96S19 204 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 RABAC1Q9UI14 185 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 RFNGQ9Y644 331 aa12.09□□□□□ -0.47
CSNK1D-212ENST00000580061 C8orf88P0DMB2 117 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 CBLN1P23435 193 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 NPPCP23582 126 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 CRYBB3P26998 211 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 ADAMTSL5Q6ZMM2 481 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 MARC2Q969Z3 335 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 GNPNAT1Q96EK6 184 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 PSMG3Q9BT73 122 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 ELOVL1Q9BW60 279 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 SH3BGRL3Q9H299 93 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 SIGLEC8Q9NYZ4 499 aa12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 MRPL27Q9P0M9 148 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-212ENST00000580061 DOK5Q9P104 306 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms