RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PTTG2Q9NZH5 202 aa4.9□□□□□ -1.63
TRAF4-213ENST00000578917 MPTX1A8MV57 137 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 UPK1BO75841 260 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 TOMM40O96008 361 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 LYL1P12980 280 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 CRYBB3P26998 211 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 S100A7P31151 101 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 NUP62P37198 522 aaPredicted RBP4.89□□□□□ -1.63
TRAF4-213ENST00000578917 BCAP31P51572 246 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 DEFA1P59665 94 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 DEFA3P59666 94 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 LYZP61626 148 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 ID3Q02535 119 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 ZNF90Q03938 601 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 ASAH1Q13510 395 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 LILRB2Q8N423 598 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 C12orf45Q8N5I9 185 aaPredicted RBP4.89□□□□□ -1.63
TRAF4-213ENST00000578917 ZBTB8BQ8NAP8 495 aaPredicted RBP4.89□□□□□ -1.63
TRAF4-213ENST00000578917 ZNF431Q8TF32 576 aaPredicted RBP4.89□□□□□ -1.63
TRAF4-213ENST00000578917 RAB40CQ96S21 281 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 SEC22CQ9BRL7 303 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 TM2D3Q9BRN9 247 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 VSIRQ9H7M9 311 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 ZFAND3Q9H8U3 227 aa4.89□□□□□ -1.63
TRAF4-213ENST00000578917 UBE2CO00762 179 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 CCSO14618 274 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 CFDP00746 253 aaPredicted RBP4.88□□□□□ -1.63
TRAF4-213ENST00000578917 METTL15P1P0C7V9 234 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 ORM2P19652 201 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 PVALBP20472 110 aaPredicted RBP4.88□□□□□ -1.63
TRAF4-213ENST00000578917 CAV2P51636 162 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 DEFB131AP59861 70 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 S100A10P60903 97 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 RRAS2P62070 204 aaPredicted RBP4.88□□□□□ -1.63
TRAF4-213ENST00000578917 SNRPD3P62318 126 aaKnown RBP4.88□□□□□ -1.63
TRAF4-213ENST00000578917 GSG1LQ6UXU4 331 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 OR10P1Q8NGE3 313 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 RNF125Q96EQ8 232 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 ZNF414Q96IQ9 312 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 SMIM8Q96KF7 97 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 FAM110AQ9BQ89 295 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 RETNQ9HD89 108 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 MGAT4CQ9UBM8 478 aa4.88□□□□□ -1.63
TRAF4-213ENST00000578917 LSM5Q9Y4Y9 91 aaKnown RBP4.88□□□□□ -1.63
TRAF4-213ENST00000578917 C3orf84H3BNL1 204 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 SPRY2O43597 315 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 SSNA1O43805 119 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 MBPP02686 304 aaPredicted RBP4.87□□□□□ -1.63
TRAF4-213ENST00000578917 RLN2P04090 185 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 IL5P05113 134 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 ZNF688P0C7X2 276 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 ID1P41134 155 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 TAS2R30P59541 319 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 USF2Q15853 346 aaPredicted RBP4.87□□□□□ -1.63
TRAF4-213ENST00000578917 ODF3L2Q3SX64 289 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 FAM90A2PQ658T7 463 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 LEMD1Q68G75 181 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 C16orf54Q6UWD8 224 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 SIGLEC15Q6ZMC9 328 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 LINC00322Q6ZN03 302 aaPredicted RBP4.87□□□□□ -1.63
TRAF4-213ENST00000578917 ACOT7LQ6ZUV0 252 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 S100A7AQ86SG5 101 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 STHQ8IWL8 128 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 OR8I2Q8N0Y5 310 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 BPIFCQ8NFQ6 507 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 OR4D5Q8NGN0 318 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 OR1B1Q8NGR6 318 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 IL17DQ8TAD2 202 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 MUC7Q8TAX7 377 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 C2orf50Q96LR7 162 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 CITED4Q96RK1 184 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 TRGV9Q99603 122 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 TMEM147Q9BVK8 224 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 CSTL1Q9H114 145 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 MAP6D1Q9H9H5 199 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 FBXL17Q9UF56 701 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 TBC1D24Q9ULP9 559 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 DNAH3Q8TD57 4116 aa4.87□□□□□ -1.63
TRAF4-213ENST00000578917 TENM2Q9NT68 2774 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 TRAV2A0A0B4J234 112 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 KIR2DL5BA0A0G2JN68 375 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 KIR2DL5BA0A0G2JPC4 375 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 C7orf66A4D0T2 115 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 INMT-MINDY4F8WBC2 141 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 GOSR2O14653 212 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 BUB3O43684 328 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 TSC22D2O75157 780 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 OR5G3P0C626 314 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 RAP2BP61225 183 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 RAB31Q13636 194 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 ZNF124Q15973 351 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 DEFB135Q30KP9 77 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 PSMG4Q5JS54 123 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 ACTL10Q5JWF8 245 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 C1orf194Q5T5A4 169 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 ZFAND6Q6FIF0 208 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 Q6ZWC4 215 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 NRARPQ7Z6K4 114 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 KIR2DL5AQ8N109 375 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 TMEM217Q8N7C4 229 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms