RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 AKR1C4P17516 323 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 ZNF90Q03938 601 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 OR2F1Q13607 317 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 SIGLEC15Q6ZMC9 328 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 LYZL2Q7Z4W2 148 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 CLVS1Q8IUQ0 354 aaPredicted RBP6.42□□□□□ -1.38
GGA3-207ENST00000578896 SMIM4Q8WVI0 70 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 DIRAS2Q96HU8 199 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 LINC00052Q96N35 136 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 WDR12Q9GZL7 423 aaKnown RBP6.42□□□□□ -1.38
GGA3-207ENST00000578896 RBKSQ9H477 322 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 NRN1Q9NPD7 142 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 TMEM56-RWDD3S4R434 201 aa6.42□□□□□ -1.38
GGA3-207ENST00000578896 IGKV1D-37A0A075B6S9 117 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 F6UB75 175 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 B3GALNT1O75752 331 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 ALDH3B2P48448 385 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 EIF2B2P49770 351 aaKnown RBP6.41□□□□□ -1.38
GGA3-207ENST00000578896 AP2S1P53680 142 aaPredicted RBP6.41□□□□□ -1.38
GGA3-207ENST00000578896 TCTAP57738 103 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 TMEM41BQ5BJD5 291 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 NMSQ5H8A3 153 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 GPR141Q7Z602 305 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 LGI3Q8N145 548 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 CENPSQ8N2Z9 138 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 C15orf40Q8WUR7 153 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 MCUBQ9NWR8 336 aa6.41□□□□□ -1.38
GGA3-207ENST00000578896 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 ANKRD20A5PA0PJZ0 165 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 ZFP92A6NM28 416 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 IAPPP10997 89 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 HLA-DRB4P13762 266 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 LYZP61626 148 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 SNRPD3P62318 126 aaKnown RBP6.4□□□□□ -1.38
GGA3-207ENST00000578896 SUPT4H1P63272 117 aaKnown RBP6.4□□□□□ -1.38
GGA3-207ENST00000578896 MRPS10P82664 201 aaKnown RBP6.4□□□□□ -1.38
GGA3-207ENST00000578896 SSBP1Q04837 148 aaKnown RBP6.4□□□□□ -1.38
GGA3-207ENST00000578896 KLF9Q13886 244 aaPredicted RBP6.4□□□□□ -1.38
GGA3-207ENST00000578896 GAMTQ14353 236 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 SURF2Q15527 256 aaPredicted RBP6.4□□□□□ -1.38
GGA3-207ENST00000578896 ETFRF1Q6IPR1 90 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 OR4B1Q8NGF8 309 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 DTD1Q8TEA8 209 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 RNF125Q96EQ8 232 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 PRRT1Q99946 306 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 RNF126Q9BV68 326 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 SLC35B3Q9H1N7 401 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 PAIP2BQ9ULR5 123 aaKnown RBP6.4□□□□□ -1.38
GGA3-207ENST00000578896 KCNIP3Q9Y2W7 256 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 HLA-DRB4X5D2U9 266 aa6.4□□□□□ -1.38
GGA3-207ENST00000578896 NACAE9PAV3 2078 aa6.39□□□□□ -1.39
GGA3-207ENST00000578896 CTDSPLO15194 276 aa6.39□□□□□ -1.39
GGA3-207ENST00000578896 SMCO1Q147U7 214 aa6.39□□□□□ -1.39
GGA3-207ENST00000578896 OR1S1Q8NH92 325 aa6.39□□□□□ -1.39
GGA3-207ENST00000578896 DYNC2LI1Q8TCX1 351 aa6.39□□□□□ -1.39
GGA3-207ENST00000578896 MRPS26Q9BYN8 205 aaKnown RBP6.39□□□□□ -1.39
GGA3-207ENST00000578896 HSPB7Q9UBY9 170 aa6.39□□□□□ -1.39
GGA3-207ENST00000578896 U3KQ87 197 aa6.39□□□□□ -1.39
GGA3-207ENST00000578896 LRP1BQ9NZR2 4599 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 IGLV2-18A0A075B6J9 118 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 A0A0B4J2A0 478 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 SOCS3O14543 225 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 GSTZ1O43708 216 aaPredicted RBP6.38□□□□□ -1.39
GGA3-207ENST00000578896 PRM2P04554 102 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 PRB4P10163 310 aaPredicted RBP6.38□□□□□ -1.39
GGA3-207ENST00000578896 HTN3P15516 51 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 GATA2P23769 480 aaPredicted RBP6.38□□□□□ -1.39
GGA3-207ENST00000578896 NKX2-1P43699 371 aaPredicted RBP6.38□□□□□ -1.39
GGA3-207ENST00000578896 CCR6P51684 374 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 NUTF2P61970 127 aaKnown RBP6.38□□□□□ -1.39
GGA3-207ENST00000578896 ZNF705AQ6ZN79 300 aaPredicted RBP6.38□□□□□ -1.39
GGA3-207ENST00000578896 TMED4Q7Z7H5 227 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 NOXA1Q86UR1 476 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 POM121L12Q8N7R1 296 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 IL22RA2Q969J5 263 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 PPP1R14BQ96C90 147 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 SLC35E1Q96K37 410 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 C20orf173Q96LM9 149 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 NDUFAF3Q9BU61 184 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 C1QTNF4Q9BXJ3 329 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 MAGT1Q9H0U3 335 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 SAV1Q9H4B6 383 aaPredicted RBP6.38□□□□□ -1.39
GGA3-207ENST00000578896 SHPKQ9UHJ6 478 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 SCP2D1Q9UJQ7 156 aa6.38□□□□□ -1.39
GGA3-207ENST00000578896 IGKV1OR2-108A0A075B7D4 117 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 A0A1B0GVY2 172 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 ZNF705FA8MVS1 300 aaPredicted RBP6.37□□□□□ -1.39
GGA3-207ENST00000578896 RTL8CO15255 209 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 AMBPP02760 352 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 ZNF705DP0CH99 300 aaPredicted RBP6.37□□□□□ -1.39
GGA3-207ENST00000578896 ZNF705BP0CI00 300 aaPredicted RBP6.37□□□□□ -1.39
GGA3-207ENST00000578896 TNFSF8P32971 234 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 FAM222AQ5U5X8 452 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 FAM78BQ5VT40 261 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 IGFL4Q6B9Z1 124 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 TMEM182Q6ZP80 229 aaPredicted RBP6.37□□□□□ -1.39
GGA3-207ENST00000578896 FOXI2Q6ZQN5 318 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 OR8I2Q8N0Y5 310 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 C1orf158Q8N1D5 194 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 ZNF709Q8N972 641 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms