RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	MBD3L3	A6NE82	208 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	NKX6-3	A6NJ46	265 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	C17orf100	A8MU93	164 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001		M0R2Z0	102 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	BRS3	P32247	399 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	CORO2A	Q92828	525 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	ZFYVE26	Q68DK2	2539 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	CSMD2	Q7Z408	3487 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	TAS2R45	P59539	299 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	KLRD1	Q13241	179 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	BORCS7	Q96B45	105 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	FAM167A-AS1	Q96KT0	104 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	C2orf88	Q9BSF0	95 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	ONECUT1	Q9UBC0	465 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	ARF6	P62330	175 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	FOXC1	Q12948	553 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	TCTEX1D1	Q8N7M0	179 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	FAM222B	Q8WU58	562 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	OR8B2	Q96RD0	313 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	CLEC7A	Q9BXN2	247 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	TMEM167B	Q9NRX6	74 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	ARL2-SNX15	V9GYD0	113 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	UNQ5815/PRO19632	Q6UWF5	114 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	GOLT1A	Q6ZVE7	132 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	TSKU	Q8WUA8	353 aa		11.91	□□□□□ -0.5
PRPF8-216	ENST00000577001	CRYBG3	Q68DQ2	2970 aa		11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	USP9Y	O00507	2555 aa	Predicted RBP	11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	LOC389332	A0A1B0GUA5	103 aa		11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001		M0R3E3	92 aa		11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	YPEL3	P61236	119 aa	Predicted RBP	11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	PEX7	O00628	323 aa		11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	PRRG2	O14669	202 aa		11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	C11orf42	Q8N5U0	333 aa		11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	TMEM208	Q9BTX3	173 aa		11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	HIVEP3	Q5T1R4	2406 aa		11.9	□□□□□ -0.5
PRPF8-216	ENST00000577001	IGHV3-49	A0A0A0MS15	119 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	THBD	P07204	575 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	TMEM183B	Q1AE95	376 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	FBLN7	Q53RD9	439 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	TMEM177	Q53S58	311 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	SPATA12	Q7Z6I5	190 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	PDPN	Q86YL7	162 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	STPG4	Q8N801	248 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	hDV102S1	A0JD36	115 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	ZNF891	A8MT65	544 aa	Predicted RBP	11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	DLL1	O00548	723 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	COMP	P49747	757 aa	Predicted RBP	11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	CX3CL1	P78423	397 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	IGHV3-66	A0A0C4DH42	116 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	KIR2DS2	P43631	304 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	LRRC10	Q5BKY1	277 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	SSX8	Q7RTT4	187 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	NDUFA4L2	Q9NRX3	87 aa		11.89	□□□□□ -0.51
PRPF8-216	ENST00000577001	TLN2	Q9Y4G6	2542 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	IGLV3-9	A0A075B6K5	115 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	TNFRSF1A	P19438	455 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	SPACA3	Q8IXA5	215 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	INSIG2	Q9Y5U4	225 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	IGKV1D-37	A0A075B6S9	117 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	ZNF329	Q86UD4	541 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	GAL3ST2	Q9H3Q3	398 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	RNF24	Q9Y225	148 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	FAM208B	Q5VWN6	2430 aa		11.88	□□□□□ -0.51
PRPF8-216	ENST00000577001	SERTM2	A0A1B0GWG4	89 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	NBEAP1	P0C6P0	100 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	HNRNPA3	P51991	378 aa	Known RBP	11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	OR4C13	Q8NGP0	309 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	C18orf32	Q8TCD1	76 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	DEFB104A	Q8WTQ1	72 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	ZNF257	Q9Y2Q1	563 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	AMY1A	P04745	511 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	CD99	P14209	185 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	PPOX	P50336	477 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	TMPRSS3	P57727	454 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	EBLN2	Q6P2I7	272 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	NIT1	Q86X76	327 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	LPAR2	Q9HBW0	351 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	ZNF324	O75467	553 aa	Predicted RBP	11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	MUC15	Q8N387	334 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001	OR1L4	Q8NGR5	311 aa		11.87	□□□□□ -0.51
PRPF8-216	ENST00000577001		E7EQL1	145 aa		11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	TMEM178B	H3BS89	294 aa		11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	RPLP1	P05386	114 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	TBR1	Q16650	682 aa		11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	TMEM116	Q8NCL8	245 aa		11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	DAZAP1	Q96EP5	407 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	NAA38	Q9BRA0	125 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	LINC00312	Q9Y6C7	94 aa		11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	LOX	P28300	417 aa	Predicted RBP	11.86	□□□□□ -0.51
PRPF8-216	ENST00000577001	C2orf83	Q53S99	150 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	FXYD5	Q96DB9	178 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	ADTRP	Q96IZ2	230 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	LOXL4	Q96JB6	756 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	MIEN1	Q9BRT3	115 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	SFXN3	Q9BWM7	321 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms