RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CBY3A6NI87 242 aa11.27□□□□□ -0.61
CTDNEP1-211ENST00000575783 FAM229AH3BQW9 127 aa11.27□□□□□ -0.61
CTDNEP1-211ENST00000575783 HLA-DMAP28067 261 aa11.27□□□□□ -0.61
CTDNEP1-211ENST00000575783 HRH1P35367 487 aa11.27□□□□□ -0.61
CTDNEP1-211ENST00000575783 AKR1C2P52895 323 aa11.27□□□□□ -0.61
CTDNEP1-211ENST00000575783 C17orf77Q96MU5 243 aa11.27□□□□□ -0.61
CTDNEP1-211ENST00000575783 ABHD1Q96SE0 405 aa11.27□□□□□ -0.61
CTDNEP1-211ENST00000575783 PBDC1Q9BVG4 233 aa11.27□□□□□ -0.61
CTDNEP1-211ENST00000575783 A0A0J9YX75 114 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 EREGO14944 169 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 AZU1P20160 251 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 PAX9P55771 341 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 SCAND1P57086 179 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 KRTAP10-1P60331 282 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 BSXQ3C1V8 233 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 LYSMD2Q8IV50 215 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 NPIPB3Q92617 1050 aa11.26□□□□□ -0.61
CTDNEP1-211ENST00000575783 EBAG9O00559 213 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 TOMM40O96008 361 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 IFNA5P01569 189 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 SLC25A4P12235 298 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 LINC00315P59091 139 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 OR5I1Q13606 314 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 GPR146Q96CH1 333 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 GNPNAT1Q96EK6 184 aaPredicted RBP11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 SSR3Q9UNL2 185 aa11.25□□□□□ -0.61
CTDNEP1-211ENST00000575783 SOCS3O14543 225 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 P0C879 139 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 PSG1P11464 419 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 NAT1P18440 290 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 HTR2BP41595 481 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 AQP4P55087 323 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 ICAM4Q14773 271 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 ESRGQ1W209 222 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 FCGR1BQ92637 280 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 HEYLQ9NQ87 328 aaPredicted RBP11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 RPRMQ9NS64 109 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 DOK5Q9P104 306 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 PFDN2Q9UHV9 154 aa11.24□□□□□ -0.61
CTDNEP1-211ENST00000575783 TRAV26-1A0A087WT03 109 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 A0A0J9YY99 117 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 PLAC8L1A1L4L8 177 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 M0R2Z0 102 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 NXPH3O95157 252 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 INSP01308 110 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 PSMB9P28065 219 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 SPINK13Q1W4C9 94 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 TMEM69Q5SWH9 247 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 CDPF1Q6NVV7 123 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 Q6ZSN1 163 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 RNF125Q96EQ8 232 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 UPK3BQ9BT76 320 aa11.23□□□□□ -0.61
CTDNEP1-211ENST00000575783 ISLRO14498 428 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 ATG12O94817 140 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 PGAM2P15259 253 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 HTN1P15515 57 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 ELK1P19419 428 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 TSPOP30536 169 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 NUP62P37198 522 aaPredicted RBP11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 ERVFC1-1P60608 527 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 HAMPP81172 84 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 Q6ZRN7 208 aaPredicted RBP11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 RNASEH2CQ8TDP1 164 aaKnown RBP11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 C20orf173Q96LM9 149 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 TP53RKQ96S44 253 aa11.22□□□□□ -0.61
CTDNEP1-211ENST00000575783 A0A0G2JRQ6 117 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 CRXO43186 299 aaPredicted RBP11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 PI3P19957 117 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 UCP3P55916 312 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 SPCS3P61009 180 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 B2MP61769 119 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 C2orf83Q53S99 150 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 BAP18Q8IXM2 172 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 RRNAD1Q96FB5 475 aaKnown RBP11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 LINC01587Q99440 93 aa11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 MRPS16Q9Y3D3 137 aaKnown RBP11.21□□□□□ -0.61
CTDNEP1-211ENST00000575783 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
CTDNEP1-211ENST00000575783 PRSS3P35030 304 aa11.2□□□□□ -0.62
CTDNEP1-211ENST00000575783 SP6Q3SY56 376 aa11.2□□□□□ -0.62
CTDNEP1-211ENST00000575783 OR11H7Q8NGC8 314 aa11.2□□□□□ -0.62
CTDNEP1-211ENST00000575783 RXFP4Q8TDU9 374 aa11.2□□□□□ -0.62
CTDNEP1-211ENST00000575783 PPP1R14BQ96C90 147 aa11.2□□□□□ -0.62
CTDNEP1-211ENST00000575783 BLOC1S6Q9UL45 172 aa11.2□□□□□ -0.62
CTDNEP1-211ENST00000575783 M6PRP20645 277 aa11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 CNN1P51911 297 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 SUPT4H1P63272 117 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 RNASE12Q5GAN4 147 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 C1orf194Q5T5A4 169 aa11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 GPR141Q7Z602 305 aa11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms