RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 TMEM182Q6ZP80 229 aaPredicted RBP16.7■□□□□ 0.26
RAB40B-207ENST00000572603 OR5C1Q8NGR4 320 aa16.7■□□□□ 0.26
RAB40B-207ENST00000572603 Q8WTZ3 238 aa16.7■□□□□ 0.26
RAB40B-207ENST00000572603 MARC2Q969Z3 335 aa16.7■□□□□ 0.26
RAB40B-207ENST00000572603 UQCC1Q9NVA1 299 aa16.7■□□□□ 0.26
RAB40B-207ENST00000572603 MLXQ9UH92 298 aa16.7■□□□□ 0.26
RAB40B-207ENST00000572603 WDR83OSQ9Y284 106 aa16.7■□□□□ 0.26
RAB40B-207ENST00000572603 SORL1Q92673 2214 aa16.69■□□□□ 0.26
RAB40B-207ENST00000572603 WI2-2373I1.2A0A1W2PRP0 233 aa16.69■□□□□ 0.26
RAB40B-207ENST00000572603 KRTAP10-11P60412 298 aa16.69■□□□□ 0.26
RAB40B-207ENST00000572603 OR2F1Q13607 317 aa16.69■□□□□ 0.26
RAB40B-207ENST00000572603 GINS3Q9BRX5 216 aa16.69■□□□□ 0.26
RAB40B-207ENST00000572603 MRPL27Q9P0M9 148 aaKnown RBP16.69■□□□□ 0.26
RAB40B-207ENST00000572603 hCG_2014768A0A024R1R8 64 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 IGHV7-4-1A0A0J9YVY3 117 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 UBE2L5PA0A1B0GUS4 154 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 SMLR1H3BR10 107 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 IL4P05112 153 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 ATP6V1FQ16864 119 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 TEPPQ6URK8 271 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 CYP2G1PQ6ZSU1 146 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 OR51G1Q8NGK1 321 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 MGST2Q99735 147 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 MEGF8Q7Z7M0 2845 aa16.68■□□□□ 0.26
RAB40B-207ENST00000572603 A0A1B0GVG6 124 aa16.67■□□□□ 0.26
RAB40B-207ENST00000572603 APOHP02749 345 aaPredicted RBP16.67■□□□□ 0.26
RAB40B-207ENST00000572603 GATA2P23769 480 aaPredicted RBP16.67■□□□□ 0.26
RAB40B-207ENST00000572603 DEFB114Q30KQ6 69 aa16.67■□□□□ 0.26
RAB40B-207ENST00000572603 BTNL8Q6UX41 500 aa16.67■□□□□ 0.26
RAB40B-207ENST00000572603 RNF125Q96EQ8 232 aa16.67■□□□□ 0.26
RAB40B-207ENST00000572603 AQP10Q96PS8 301 aa16.67■□□□□ 0.26
RAB40B-207ENST00000572603 SMPXQ9UHP9 88 aa16.67■□□□□ 0.26
RAB40B-207ENST00000572603 SELENOKQ9Y6D0 94 aa16.67■□□□□ 0.26
RAB40B-207ENST00000572603 IGHV3-49A0A0A0MS15 119 aa16.66■□□□□ 0.26
RAB40B-207ENST00000572603 FABP1P07148 127 aa16.66■□□□□ 0.26
RAB40B-207ENST00000572603 CRYBB3P26998 211 aa16.66■□□□□ 0.26
RAB40B-207ENST00000572603 CLINT1Q14677 625 aa16.66■□□□□ 0.26
RAB40B-207ENST00000572603 DYNLRB2Q8TF09 96 aa16.66■□□□□ 0.26
RAB40B-207ENST00000572603 ST6GAL2Q96JF0 529 aa16.66■□□□□ 0.26
RAB40B-207ENST00000572603 TNFSF18Q9UNG2 199 aa16.66■□□□□ 0.26
RAB40B-207ENST00000572603 U3KQE9 123 aa16.66■□□□□ 0.26
RAB40B-207ENST00000572603 FXYD6-FXYD2A0A087WZ82 144 aa16.65■□□□□ 0.26
RAB40B-207ENST00000572603 RNF222A6NCQ9 220 aa16.65■□□□□ 0.26
RAB40B-207ENST00000572603 IZUMO1RA6ND01 250 aa16.65■□□□□ 0.26
RAB40B-207ENST00000572603 CHEK1O14757 476 aa16.65■□□□□ 0.26
RAB40B-207ENST00000572603 CD300EQ496F6 205 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-207ENST00000572603 GGTLC1Q9BX51 225 aa16.65■□□□□ 0.26
RAB40B-207ENST00000572603 VSIRQ9H7M9 311 aa16.65■□□□□ 0.26
RAB40B-207ENST00000572603 TECRQ9NZ01 308 aaKnown RBP16.65■□□□□ 0.26
RAB40B-207ENST00000572603 SLC45A2Q9UMX9 530 aa16.65■□□□□ 0.26
RAB40B-207ENST00000572603 IGHV3OR16-13A0A075B7E8 117 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 IGHV3-74A0A0B4J1X5 117 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 AGPAT2O15120 278 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 LYZP61626 148 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 STPG3Q8N7X2 389 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 OR2K2Q8NGT1 345 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 ST8SIA2Q92186 375 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 METTL26Q96S19 204 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 ATP5SQ99766 215 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 RHPN1-AS1Q9BWJ2 59 aa16.64■□□□□ 0.25
RAB40B-207ENST00000572603 HNRNPCP07910 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
RAB40B-207ENST00000572603 SELENOTP62341 195 aa16.63■□□□□ 0.25
RAB40B-207ENST00000572603 ZNF546Q86UE3 836 aa16.63■□□□□ 0.25
RAB40B-207ENST00000572603 TMEM61Q8N0U2 210 aa16.63■□□□□ 0.25
RAB40B-207ENST00000572603 BPIFCQ8NFQ6 507 aa16.63■□□□□ 0.25
RAB40B-207ENST00000572603 PBDC1Q9BVG4 233 aa16.63■□□□□ 0.25
RAB40B-207ENST00000572603 SMIM3Q9BZL3 60 aa16.63■□□□□ 0.25
RAB40B-207ENST00000572603 WFDC1Q9HC57 220 aa16.63■□□□□ 0.25
RAB40B-207ENST00000572603 FBXL17Q9UF56 701 aa16.63■□□□□ 0.25
RAB40B-207ENST00000572603 CFDP00746 253 aaPredicted RBP16.62■□□□□ 0.25
RAB40B-207ENST00000572603 LINC00869P0C866 280 aa16.62■□□□□ 0.25
RAB40B-207ENST00000572603 FGF7P21781 194 aa16.62■□□□□ 0.25
RAB40B-207ENST00000572603 NPPCP23582 126 aa16.62■□□□□ 0.25
RAB40B-207ENST00000572603 CAMLGP49069 296 aa16.62■□□□□ 0.25
RAB40B-207ENST00000572603 OPCMLQ14982 345 aa16.62■□□□□ 0.25
RAB40B-207ENST00000572603 OR11H4Q8NGC9 324 aa16.62■□□□□ 0.25
RAB40B-207ENST00000572603 RNF2Q99496 336 aa16.62■□□□□ 0.25
RAB40B-207ENST00000572603 IGHV3-66A0A0C4DH42 116 aa16.61■□□□□ 0.25
RAB40B-207ENST00000572603 EIF2B2P49770 351 aaKnown RBP16.61■□□□□ 0.25
RAB40B-207ENST00000572603 PLP1P60201 277 aa16.61■□□□□ 0.25
RAB40B-207ENST00000572603 LCN12Q6JVE5 192 aa16.61■□□□□ 0.25
RAB40B-207ENST00000572603 WDR61Q9GZS3 305 aaKnown RBP16.61■□□□□ 0.25
RAB40B-207ENST00000572603 RABAC1Q9UI14 185 aa16.61■□□□□ 0.25
RAB40B-207ENST00000572603 ZNF256Q9Y2P7 627 aaPredicted RBP16.61■□□□□ 0.25
RAB40B-207ENST00000572603 MPDU1O75352 247 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 PRR20EP86478 221 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 PRR20CP86479 221 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 PRR20DP86480 221 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 PRR20BP86481 221 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 PRR20AP86496 221 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 FAM90A2PQ658T7 463 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 TCTE3Q8IZS6 198 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 NPCDR1Q9BY65 106 aa16.6■□□□□ 0.25
RAB40B-207ENST00000572603 ZNF785A8K8V0 405 aa16.59■□□□□ 0.25
RAB40B-207ENST00000572603 DFFBO76075 338 aa16.59■□□□□ 0.25
RAB40B-207ENST00000572603 MIC13Q5XKP0 118 aa16.59■□□□□ 0.25
RAB40B-207ENST00000572603 AURKAIP1Q9NWT8 199 aaPredicted RBP16.59■□□□□ 0.25
RAB40B-207ENST00000572603 TRAV25A0A0B4J276 109 aa16.58■□□□□ 0.24
RAB40B-207ENST00000572603 ARPC5O15511 151 aa16.58■□□□□ 0.24
RAB40B-207ENST00000572603 BUB3O43684 328 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms