RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 ZFP92A6NM28 416 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 PPP5D1E7EU14 171 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 BOLA2-SMG1P6H3BVE0 249 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 BMPR1BO00238 502 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 NUPL2O15504 423 aaKnown RBP8.03□□□□□ -1.12
CDH3-210ENST00000569117 BCL2L11O43521 198 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 MPDU1O75352 247 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 IGKV1-17P01599 117 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 CLEC3BP05452 202 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 CTSGP08311 255 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 FHL3Q13643 280 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 LGALSLQ3ZCW2 172 aaPredicted RBP8.03□□□□□ -1.12
CDH3-210ENST00000569117 STPG3Q8N7X2 389 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 PPP1R14BQ96C90 147 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 TRGV9Q99603 122 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 CHRDL1Q9BU40 450 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 WDR61Q9GZS3 305 aaKnown RBP8.03□□□□□ -1.12
CDH3-210ENST00000569117 ARL6Q9H0F7 186 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 WFDC1Q9HC57 220 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 STAB1Q9NY15 2570 aa8.03□□□□□ -1.12
CDH3-210ENST00000569117 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 A0A087WW49 117 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 KANTRA0A1W2PQU2 76 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 GGCTO75223 188 aaKnown RBP8.02□□□□□ -1.13
CDH3-210ENST00000569117 IFNA5P01569 189 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 HSPB1P04792 205 aaKnown RBP8.02□□□□□ -1.13
CDH3-210ENST00000569117 FABP1P07148 127 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 NKX2-5P52952 324 aaPredicted RBP8.02□□□□□ -1.13
CDH3-210ENST00000569117 YPEL3P61236 119 aaPredicted RBP8.02□□□□□ -1.13
CDH3-210ENST00000569117 RELQ04864 619 aaPredicted RBP8.02□□□□□ -1.13
CDH3-210ENST00000569117 DEFB136Q30KP8 78 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 KRTAP21-3Q3LHN1 58 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 TIGITQ495A1 244 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 LAMTOR1Q6IAA8 161 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 BTNL8Q6UX41 500 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 TMUB2Q71RG4 321 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 C3orf56Q8N813 242 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 ZNF414Q96IQ9 312 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 MGST2Q99735 147 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 C1orf43Q9BWL3 253 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 GGTLC1Q9BX51 225 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 NPCDR1Q9BY65 106 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 PLA2G2DQ9UNK4 145 aa8.02□□□□□ -1.13
CDH3-210ENST00000569117 BORCS7-ASMTA0A0B4J1R7 106 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 LINC01619G3V211 115 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 AGPAT2O15120 278 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 TOMM40O96008 361 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 HNRNPCP07910 306 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDH3-210ENST00000569117 ZP3P21754 424 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 FGF7P21781 194 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 HOXD3P31249 432 aaPredicted RBP8.01□□□□□ -1.13
CDH3-210ENST00000569117 SELENOTP62341 195 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 ZNF616Q08AN1 781 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 RAB31Q13636 194 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 OPCMLQ14982 345 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 RPEL1Q2QD12 228 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 NSUN5P1Q3KNT7 163 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 RPL7L1Q6DKI1 246 aaKnown RBP8.01□□□□□ -1.13
CDH3-210ENST00000569117 ZNF600Q6ZNG1 722 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 OR11H1Q8NG94 326 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 CYTL1Q9NRR1 136 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 KCNIP2Q9NS61 270 aa8.01□□□□□ -1.13
CDH3-210ENST00000569117 PRSS47A8MTI9 375 aa8□□□□□ -1.13
CDH3-210ENST00000569117 CCL24O00175 119 aa8□□□□□ -1.13
CDH3-210ENST00000569117 NDUFA4O00483 81 aa8□□□□□ -1.13
CDH3-210ENST00000569117 JTBO76095 146 aa8□□□□□ -1.13
CDH3-210ENST00000569117 OR2C1O95371 312 aa8□□□□□ -1.13
CDH3-210ENST00000569117 C4BPBP20851 252 aa8□□□□□ -1.13
CDH3-210ENST00000569117 CAMLGP49069 296 aa8□□□□□ -1.13
CDH3-210ENST00000569117 ZNF90Q03938 601 aa8□□□□□ -1.13
CDH3-210ENST00000569117 CYP2G1PQ6ZSU1 146 aa8□□□□□ -1.13
CDH3-210ENST00000569117 GPHB5Q86YW7 130 aa8□□□□□ -1.13
CDH3-210ENST00000569117 OR1N2Q8NGR9 330 aa8□□□□□ -1.13
CDH3-210ENST00000569117 STOML3Q8TAV4 291 aa8□□□□□ -1.13
CDH3-210ENST00000569117 TMEM190Q8WZ59 177 aa8□□□□□ -1.13
CDH3-210ENST00000569117 DPF1Q92782 380 aa8□□□□□ -1.13
CDH3-210ENST00000569117 ARV1Q9H2C2 271 aa8□□□□□ -1.13
CDH3-210ENST00000569117 SLC45A2Q9UMX9 530 aa8□□□□□ -1.13
CDH3-210ENST00000569117 A8MWP6 167 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 C17orf112F2Z3M2 114 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 CFDP00746 253 aaPredicted RBP7.99□□□□□ -1.13
CDH3-210ENST00000569117 RD3LP0DJH9 198 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 PSG1P11464 419 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 MYCNOSP40205 109 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 RPL29P47914 159 aaKnown RBP7.99□□□□□ -1.13
CDH3-210ENST00000569117 C1QL4Q86Z23 238 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 BPIFCQ8NFQ6 507 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 OR4F17Q8NGA8 305 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 OR51G1Q8NGK1 321 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 SCGB1C1Q8TD33 95 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 DUX3Q96PT4 197 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 OR4F4Q96R69 305 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 PSMG3Q9BT73 122 aaPredicted RBP7.99□□□□□ -1.13
CDH3-210ENST00000569117 RSG1Q9BU20 258 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 ZNF471Q9BX82 626 aaPredicted RBP7.99□□□□□ -1.13
CDH3-210ENST00000569117 TIMM9Q9Y5J7 89 aa7.99□□□□□ -1.13
CDH3-210ENST00000569117 PUS1Q9Y606 427 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDH3-210ENST00000569117 ANK2Q01484 3957 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 IGHV3-35A0A0C4DH35 117 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 WI2-2373I1.2A0A1W2PRP0 233 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms