RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, human

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT140-208	ENST00000566818	DHRS2	Q13268	280 aa		13.78	□□□□□ -0.2
IFT140-208	ENST00000566818	PPP1R1A	Q13522	171 aa		13.78	□□□□□ -0.2
IFT140-208	ENST00000566818	GLMP	Q8WWB7	406 aa		13.78	□□□□□ -0.2
IFT140-208	ENST00000566818	CIB3	Q96Q77	187 aa	Predicted RBP	13.78	□□□□□ -0.2
IFT140-208	ENST00000566818	RARRES2	Q99969	163 aa		13.78	□□□□□ -0.2
IFT140-208	ENST00000566818	IAPP	P10997	89 aa		13.77	□□□□□ -0.21
IFT140-208	ENST00000566818	PSG1	P11464	419 aa		13.77	□□□□□ -0.21
IFT140-208	ENST00000566818	RPP30	P78346	268 aa	Known RBP	13.77	□□□□□ -0.21
IFT140-208	ENST00000566818	TMEM41B	Q5BJD5	291 aa		13.77	□□□□□ -0.21
IFT140-208	ENST00000566818	OR51G1	Q8NGK1	321 aa		13.77	□□□□□ -0.21
IFT140-208	ENST00000566818	DCANP1	Q8TF63	244 aa		13.77	□□□□□ -0.21
IFT140-208	ENST00000566818	PAIP2B	Q9ULR5	123 aa	Known RBP	13.77	□□□□□ -0.21
IFT140-208	ENST00000566818	HYDIN	Q4G0P3	5121 aa		13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	SPP1	P10451	314 aa		13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	OR8G2P	Q6IF36	304 aa		13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	SIGLEC15	Q6ZMC9	328 aa		13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	OR11H2	Q8NH07	326 aa		13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	RNF125	Q96EQ8	232 aa		13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	PBDC1	Q9BVG4	233 aa		13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	C11orf68	Q9H3H3	251 aa	Known RBP	13.76	□□□□□ -0.21
IFT140-208	ENST00000566818	SNRPD3	P62318	126 aa	Known RBP	13.75	□□□□□ -0.21
IFT140-208	ENST00000566818	GAMT	Q14353	236 aa		13.75	□□□□□ -0.21
IFT140-208	ENST00000566818	MORN3	Q6PF18	240 aa	Predicted RBP	13.75	□□□□□ -0.21
IFT140-208	ENST00000566818	TRPT1	Q86TN4	253 aa	Known RBP	13.75	□□□□□ -0.21
IFT140-208	ENST00000566818	NRN1	Q9NPD7	142 aa		13.75	□□□□□ -0.21
IFT140-208	ENST00000566818	KLK5	Q9Y337	293 aa	Predicted RBP	13.75	□□□□□ -0.21
IFT140-208	ENST00000566818	CENPX	A8MT69	81 aa		13.74	□□□□□ -0.21
IFT140-208	ENST00000566818	BUB3	O43684	328 aa		13.74	□□□□□ -0.21
IFT140-208	ENST00000566818	HOXB5	P09067	269 aa		13.74	□□□□□ -0.21
IFT140-208	ENST00000566818	PSMG4	Q5JS54	123 aa		13.74	□□□□□ -0.21
IFT140-208	ENST00000566818	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.74	□□□□□ -0.21
IFT140-208	ENST00000566818	MFF	Q9GZY8	342 aa		13.74	□□□□□ -0.21
IFT140-208	ENST00000566818	SEPSECS	Q9HD40	501 aa	Known RBP	13.74	□□□□□ -0.21
IFT140-208	ENST00000566818	KNCN	A6PVL3	124 aa		13.73	□□□□□ -0.21
IFT140-208	ENST00000566818	SYNGR2	O43760	224 aa		13.73	□□□□□ -0.21
IFT140-208	ENST00000566818	NDUFB6	O95139	128 aa		13.73	□□□□□ -0.21
IFT140-208	ENST00000566818	ACTL10	Q5JWF8	245 aa		13.73	□□□□□ -0.21
IFT140-208	ENST00000566818	GGNBP1	Q5YKI7	109 aa		13.73	□□□□□ -0.21
IFT140-208	ENST00000566818	COQ8A	Q8NI60	647 aa		13.73	□□□□□ -0.21
IFT140-208	ENST00000566818	MAGT1	Q9H0U3	335 aa		13.73	□□□□□ -0.21
IFT140-208	ENST00000566818	FBXL17	Q9UF56	701 aa		13.73	□□□□□ -0.21
IFT140-208	ENST00000566818	LYZ	P61626	148 aa		13.72	□□□□□ -0.21
IFT140-208	ENST00000566818	BAK1	Q16611	211 aa		13.72	□□□□□ -0.21
IFT140-208	ENST00000566818	TRGV9	Q99603	122 aa		13.72	□□□□□ -0.21
IFT140-208	ENST00000566818	C7orf50	Q9BRJ6	194 aa	Known RBP	13.72	□□□□□ -0.21
IFT140-208	ENST00000566818	IGKV1D-37	A0A075B6S9	117 aa		13.71	□□□□□ -0.21
IFT140-208	ENST00000566818	C9orf170	A2RU37	121 aa		13.71	□□□□□ -0.21
IFT140-208	ENST00000566818	WRB	O00258	174 aa		13.71	□□□□□ -0.21
IFT140-208	ENST00000566818	ZNF90	Q03938	601 aa		13.71	□□□□□ -0.21
IFT140-208	ENST00000566818	LINC00476	Q8WZB0	136 aa		13.71	□□□□□ -0.21
IFT140-208	ENST00000566818	PPP1R14B	Q96C90	147 aa		13.71	□□□□□ -0.21
IFT140-208	ENST00000566818	SNRPGP15	A8MWD9	76 aa		13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	CFD	P00746	253 aa	Predicted RBP	13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	IFNA21	P01568	189 aa		13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	C1orf194	Q5T5A4	169 aa		13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	THAP8	Q8NA92	274 aa		13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	C11orf45	Q8TAV5	145 aa		13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	RAB40C	Q96S21	281 aa		13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	STRAP	Q9Y3F4	350 aa	Known RBP	13.7	□□□□□ -0.22
IFT140-208	ENST00000566818	LINC00854	A0A1B0GVQ3	168 aa		13.69	□□□□□ -0.22
IFT140-208	ENST00000566818	C4BPB	P20851	252 aa		13.69	□□□□□ -0.22
IFT140-208	ENST00000566818	NUTF2	P61970	127 aa	Known RBP	13.69	□□□□□ -0.22
IFT140-208	ENST00000566818	OR2F1	Q13607	317 aa		13.69	□□□□□ -0.22
IFT140-208	ENST00000566818	C4orf46	Q504U0	113 aa		13.69	□□□□□ -0.22
IFT140-208	ENST00000566818	SPANXN5	Q5MJ07	72 aa		13.69	□□□□□ -0.22
IFT140-208	ENST00000566818	NDUFA13	Q9P0J0	144 aa		13.69	□□□□□ -0.22
IFT140-208	ENST00000566818	ADAP1	O75689	374 aa		13.68	□□□□□ -0.22
IFT140-208	ENST00000566818	OR4E1	P0C645	316 aa		13.68	□□□□□ -0.22
IFT140-208	ENST00000566818	IL7	P13232	177 aa		13.68	□□□□□ -0.22
IFT140-208	ENST00000566818	ID1	P41134	155 aa		13.68	□□□□□ -0.22
IFT140-208	ENST00000566818	AKR1C1	Q04828	323 aa		13.68	□□□□□ -0.22
IFT140-208	ENST00000566818	CNPY1	Q3B7I2	92 aa		13.68	□□□□□ -0.22
IFT140-208	ENST00000566818	C1QTNF4	Q9BXJ3	329 aa		13.68	□□□□□ -0.22
IFT140-208	ENST00000566818	FLVCR2	Q9UPI3	526 aa		13.68	□□□□□ -0.22
IFT140-208	ENST00000566818		H3BP45	60 aa		13.67	□□□□□ -0.22
IFT140-208	ENST00000566818	LY6G6C	O95867	125 aa		13.67	□□□□□ -0.22
IFT140-208	ENST00000566818	GIG44	P09565	113 aa	Predicted RBP	13.67	□□□□□ -0.22
IFT140-208	ENST00000566818	MIF	P14174	115 aa		13.67	□□□□□ -0.22
IFT140-208	ENST00000566818	S100A7	P31151	101 aa		13.67	□□□□□ -0.22
IFT140-208	ENST00000566818	NKX2-1	P43699	371 aa	Predicted RBP	13.67	□□□□□ -0.22
IFT140-208	ENST00000566818	SAMD13	Q5VXD3	122 aa		13.67	□□□□□ -0.22
IFT140-208	ENST00000566818	SDHC	Q99643	169 aa	Predicted RBP	13.67	□□□□□ -0.22
IFT140-208	ENST00000566818	PRSS46	E5RG02	174 aa		13.66	□□□□□ -0.22
IFT140-208	ENST00000566818	DEFB4A	O15263	64 aa		13.66	□□□□□ -0.22
IFT140-208	ENST00000566818	PSMB3	P49720	205 aa		13.66	□□□□□ -0.22
IFT140-208	ENST00000566818	NANOS2	P60321	138 aa	Known RBP	13.66	□□□□□ -0.22
IFT140-208	ENST00000566818	OR8I2	Q8N0Y5	310 aa		13.66	□□□□□ -0.22
IFT140-208	ENST00000566818		Q8NAQ8	132 aa		13.66	□□□□□ -0.22
IFT140-208	ENST00000566818	BPIFC	Q8NFQ6	507 aa		13.66	□□□□□ -0.22
IFT140-208	ENST00000566818	SLC45A2	Q9UMX9	530 aa		13.66	□□□□□ -0.22
IFT140-208	ENST00000566818	IGKV1OR2-108	A0A075B7D4	117 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	SSSCA1	O60232	199 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	HLA-DRB4	P13762	266 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	ANXA7	P20073	488 aa	Known RBP	13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	BTC	P35070	178 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	POLR2G	P62487	172 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	ID3	Q02535	119 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms