RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 CLINT1Q14677 625 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 BEAN1Q3B7T3 259 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 FAM106AQ4KMX7 169 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 C9orf66Q5T8R8 295 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 LILRB2Q8N423 598 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 OR11H4Q8NGC9 324 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 THAP6Q8TBB0 222 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 RNF125Q96EQ8 232 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 AQP10Q96PS8 301 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 MGST2Q99735 147 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 C20orf24Q9BUV8 137 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 SLC25A31Q9H0C2 315 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 UQCC1Q9NVA1 299 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 PEMTQ9UBM1 199 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 MLXQ9UH92 298 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 TNFSF18Q9UNG2 199 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 UFC1Q9Y3C8 167 aa6.18□□□□□ -1.42
CDH13-208ENST00000566333 FXYD6-FXYD2A0A087WZ82 144 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 IGHV7-4-1A0A0J9YVY3 117 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 K7EMT4 169 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 YIF1AO95070 293 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 APOHP02749 345 aaPredicted RBP6.17□□□□□ -1.42
CDH13-208ENST00000566333 IL4P05112 153 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 RD3LP0DJH9 198 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 FOLR2P14207 255 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 CBLN1P23435 193 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 GATA2P23769 480 aaPredicted RBP6.17□□□□□ -1.42
CDH13-208ENST00000566333 KRTAP10-11P60412 298 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 CD300CQ08708 224 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 OR2F1Q13607 317 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 BTNL8Q6UX41 500 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 STPG3Q8N7X2 389 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 OR51G1Q8NGK1 321 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 ATP5SQ99766 215 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 GGTLC1Q9BX51 225 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 WFDC1Q9HC57 220 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 FBXL17Q9UF56 701 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 SELENOKQ9Y6D0 94 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 U3KQE9 123 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 COL7A1Q02388 2944 aa6.17□□□□□ -1.42
CDH13-208ENST00000566333 DNAH9Q9NYC9 4486 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 IGHV3-49A0A0A0MS15 119 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 IZUMO1RA6ND01 250 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 AGPAT2O15120 278 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 LINC00869P0C866 280 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 FGF7P21781 194 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 CRYBB3P26998 211 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 INSL3P51460 131 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 OPCMLQ14982 345 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 ATP6V1FQ16864 119 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 CD300EQ496F6 205 aaPredicted RBP6.16□□□□□ -1.42
CDH13-208ENST00000566333 ZNF546Q86UE3 836 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 TCTE3Q8IZS6 198 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 TMEM61Q8N0U2 210 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 ST8SIA2Q92186 375 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 MARC2Q969Z3 335 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 GINS3Q9BRX5 216 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 ELOVL1Q9BW60 279 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 NPCDR1Q9BY65 106 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 GPR61Q9BZJ8 451 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 SMIM3Q9BZL3 60 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 VSIRQ9H7M9 311 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 NPVFQ9HCQ7 196 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 MRPL27Q9P0M9 148 aaKnown RBP6.16□□□□□ -1.42
CDH13-208ENST00000566333 SMPXQ9UHP9 88 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 SLC45A2Q9UMX9 530 aa6.16□□□□□ -1.42
CDH13-208ENST00000566333 TENM3Q9P273 2699 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 IGHV3OR16-13A0A075B7E8 117 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 IGHV3-74A0A0B4J1X5 117 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 CHEK1O14757 476 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 ARPC5O15511 151 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 FABP1P07148 127 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 CAMLGP49069 296 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 PLP1P60201 277 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 LYZP61626 148 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 SELENOTP62341 195 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 PRR20EP86478 221 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 PRR20CP86479 221 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 PRR20DP86480 221 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 PRR20BP86481 221 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 PRR20AP86496 221 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 DEFB114Q30KQ6 69 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 MIC13Q5XKP0 118 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 BPIFCQ8NFQ6 507 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 Q8WTZ3 238 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 GLMPQ8WWB7 406 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 METTL26Q96S19 204 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 RNF2Q99496 336 aa6.15□□□□□ -1.42
CDH13-208ENST00000566333 WDR61Q9GZS3 305 aaKnown RBP6.15□□□□□ -1.42
CDH13-208ENST00000566333 AGRNO00468 2067 aa6.14□□□□□ -1.43
CDH13-208ENST00000566333 IGHV3-66A0A0C4DH42 116 aa6.14□□□□□ -1.43
CDH13-208ENST00000566333 HMSDA8MTL9 139 aa6.14□□□□□ -1.43
CDH13-208ENST00000566333 MPDU1O75352 247 aa6.14□□□□□ -1.43
CDH13-208ENST00000566333 HNRNPCP07910 306 aaKnown RBP eCLIP6.14□□□□□ -1.43
CDH13-208ENST00000566333 EIF2B2P49770 351 aaKnown RBP6.14□□□□□ -1.43
CDH13-208ENST00000566333 ZNF345Q14585 488 aa6.14□□□□□ -1.43
CDH13-208ENST00000566333 FAM90A2PQ658T7 463 aa6.14□□□□□ -1.43
CDH13-208ENST00000566333 PATE2Q6UY27 113 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms